DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr100A

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_651829.1 Gene:Cpr100A / 43657 FlyBaseID:FBgn0039805 Length:241 Species:Drosophila melanogaster


Alignment Length:197 Identity:44/197 - (22%)
Similarity:75/197 - (38%) Gaps:34/197 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGLGGVAVQGGSSY 73
            :||..|...|.|.:.....:....:.....:..|||:..|||..:||:..:|........|..||
  Fly     5 LALTTLVALASSQHYHQDPKTAAIISEQRYLSGDGKFGAAYEQEDGINFKEETDADGTRHGSYSY 69

  Fly    74 TSPEGEVISVNYVADEFGYHPVGAHIPQVPDYILRSLEYIRTHPYQIKDYYTGELKTVEHDAAA- 137
            ..|.|:..:::|.|.:.|:...|.|:||.|.   ...:.:.|..||.:..|..:    ::.|.| 
  Fly    70 LDPTGQRRTISYTAGKNGFQASGDHLPQAPP---APPQPVPTAGYQPQQQYQPQ----QYQAPAP 127

  Fly   138 --------------------FN--VYTRNIQDHTIPQSRPS--TTPKTIYLTHP--PTTTSRPLR 176
                                :|  .:.:|.|.:..|.::|.  ..|:..|...|  |....:|..
  Fly   128 QPQASFRSNDYGDDGSYDPRYNDPSFGQNQQSYQQPAAQPQYRPAPQPAYNPQPVQPQQQYQPQY 192

  Fly   177 QR 178
            |:
  Fly   193 QQ 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 13/46 (28%)
Cpr100ANP_651829.1 Chitin_bind_4 44..88 CDD:459790 13/43 (30%)

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