DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Ccp84Ab

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_649682.1 Gene:Ccp84Ab / 40824 FlyBaseID:FBgn0004782 Length:221 Species:Drosophila melanogaster


Alignment Length:183 Identity:40/183 - (21%)
Similarity:62/183 - (33%) Gaps:38/183 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LAVLQ---VQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEG----LGGVAVQ 68
            :||.|   |:|...|.|..                 :||::|...:.::...:|    ..|..|:
  Fly    42 VAVAQKVVVKAAEEYDPHP-----------------QYRFSYGVDDKLTGDNKGQVEERDGDVVR 89

  Fly    69 GGSSYTSPEGEVISVNYVADEF-GYHPVGAHIPQVPDYILRSLEYIRTHPYQIKDYYTGELKTVE 132
            |..|....:|...:|.|.||.. |::.|....|.|....:..:  ::|....:..|   ....|.
  Fly    90 GEYSLIDADGYKRTVQYTADPINGFNAVVNREPLVKAVAVAPV--VKTVAAPVAQY---AAPAVA 149

  Fly   133 HDAAAFNVYT-RNIQDHTIPQSRPSTTPKTIYLTHPPTTTSRPLRQRRALPTH 184
            |.||...|.| ..:..:..|....:..|...|.......|       .|.|||
  Fly   150 HYAAPAVVKTVAPVAHYAAPAVVKTVAPVAHYAAPAAYAT-------YAAPTH 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 13/51 (25%)
Ccp84AbNP_649682.1 Chitin_bind_4 62..114 CDD:459790 13/51 (25%)

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