DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Ccp84Ac

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_649681.1 Gene:Ccp84Ac / 40823 FlyBaseID:FBgn0004781 Length:217 Species:Drosophila melanogaster


Alignment Length:133 Identity:31/133 - (23%)
Similarity:44/133 - (33%) Gaps:26/133 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KYRYAYETSNGISASQ----EGLGGVAVQGGSSYTSPEGEVISVNYVADEF-GYHPVG-----AH 98
            ||.:||:..:.:|...    |...|..|||..|....:|...:|.|.||.. |::.|.     ||
  Fly    64 KYNFAYDVQDALSGDSKSQVESRDGDVVQGEYSLDDADGFRRTVKYTADSVNGFNAVVHREPLAH 128

  Fly    99 IPQVPDYILRSLEYIRTHPYQIKDYYTGELKTVEHDAAAFNVYTRNIQDHTIPQSRPSTTPKTIY 163
            :..         :.:...|.|   |:......    ||....|....|.:..|...........|
  Fly   129 VHH---------KVVAAAPVQ---YHHAPAAA----AAVIKSYASPSQAYVAPTYAAPAYTAPAY 177

  Fly   164 LTH 166
            .||
  Fly   178 ATH 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 15/51 (29%)
Ccp84AcNP_649681.1 Chitin_bind_4 65..117 CDD:459790 15/51 (29%)

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