DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Edg78E

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_524198.1 Gene:Edg78E / 40354 FlyBaseID:FBgn0000551 Length:122 Species:Drosophila melanogaster


Alignment Length:117 Identity:54/117 - (46%)
Similarity:72/117 - (61%) Gaps:7/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGLGGVAVQ 68
            :..::..||::......:.  :.|...|:.||| ..:.:|.|:|||||||||...:.|....| :
  Fly     1 MYKYLFCLALIGCACADNI--NKDAQIRSFQND-ATDAEGNYQYAYETSNGIQIQEAGNANGA-R 61

  Fly    69 GGSSYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTHP 117
            |..:|.|||||.||:.|.|||.||||||.|:   |.||.|:||:||||||||
  Fly    62 GAVAYVSPEGEHISLTYTADEEGYHPVGDHLPTPPPVPAYVLRALEYIRTHP 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 25/46 (54%)
Edg78ENP_524198.1 Chitin_bind_4 39..85 CDD:459790 25/46 (54%)

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