DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr78Cb

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_649299.2 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster


Alignment Length:129 Identity:52/129 - (40%)
Similarity:72/129 - (55%) Gaps:21/129 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NFIVALAVL------------QVQAGSSYIPDSDRNTRTLQNDLQV---ERDGKYRYAYETSNGI 55
            ||::.:.:|            :|:.....:..|:|:.|.  .|.:|   :.:|.::||::|||||
  Fly     3 NFLIGMVLLALIWVEVDARLVRVRRIRRLVGASERDARI--TDFRVSPTDDEGVFKYAFKTSNGI 65

  Fly    56 SASQEGLGGVAVQGGSSYTSPEGEVISVNYVADEFGYHPVGAHIPQ---VPDYILRSLEYIRTH 116
            .....| ..:...|..|||||||..|...|:|||.|:|.||.|:||   .||||||||||||||
  Fly    66 DVQAAG-SPLETIGIYSYTSPEGVPIETRYIADELGFHVVGRHLPQPPPTPDYILRSLEYIRTH 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 21/46 (46%)
Cpr78CbNP_649299.2 Chitin_bind_4 55..101 CDD:459790 21/46 (46%)

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