DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr78Ca

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster


Alignment Length:114 Identity:42/114 - (36%)
Similarity:61/114 - (53%) Gaps:3/114 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGLGGVAVQ 68
            :|.|:|.:.|..:.......|..||.  ....:...:..|.|.:.::|:|||:....|....|| 
  Fly     7 IVVFLVLVLVQLIHCTRFTAPSLDRT--IYYRNTPPDPFGHYSFEFQTTNGITTKGAGNENGAV- 68

  Fly    69 GGSSYTSPEGEVISVNYVADEFGYHPVGAHIPQVPDYILRSLEYIRTHP 117
            |...:.||||..::.:||||..||.|.|.|||.:|.:::|.||||||||
  Fly    69 GVVQFVSPEGIPVTFSYVADANGYQPTGDHIPAIPLHVIRQLEYIRTHP 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 17/46 (37%)
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:459790 17/46 (37%)

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