DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr66Cb

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_648209.1 Gene:Cpr66Cb / 38940 FlyBaseID:FBgn0035875 Length:162 Species:Drosophila melanogaster


Alignment Length:112 Identity:26/112 - (23%)
Similarity:49/112 - (43%) Gaps:27/112 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDQVSSSD----EEERWKDPKLTNDVPSEYWHIQKLVKYMKAGNQTATIV--ALCCLKDH-DLTT 62
            :.||.|:.    .:|:|:||   :.:..|   :|:....:|...:.:..:  :|.|||:. :.|.
  Fly    32 ASQVYSNHLKVMHDEKWEDP---SGIKIE---LQETRYDLKRAKEESIQMRNSLSCLKEELERTK 90

  Fly    63 QMNQRAIQDCG-------------GLEVLVNLLESNDMKC-RLGALS 95
            |..|:...|.|             ..||||..::...::. ||.::|
  Fly    91 QELQKLRVDPGVNETKLDETVFKTKFEVLVPRVDDEPIRSPRLRSMS 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 14/63 (22%)
Cpr66CbNP_648209.1 Chitin_bind_4 89..141 CDD:459790 12/49 (24%)

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