DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr64Ac

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_647874.1 Gene:Cpr64Ac / 38510 FlyBaseID:FBgn0035512 Length:188 Species:Drosophila melanogaster


Alignment Length:83 Identity:19/83 - (22%)
Similarity:27/83 - (32%) Gaps:33/83 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DQVSSSDEEERWKDPKLTNDVP-------------SEYWHIQKLVK----------YMKAGNQTA 47
            :.||:|||...    .|.|.:|             :|.|.:..|.:          ..|...|||
  Fly   420 EYVSNSDEPTH----LLVNGLPYEAPVTETPKSGTTEVWEVINLTEDNHPLHIHLGLFKVVEQTA 480

  Fly    48 TIVA------LCCLKDHD 59
            .:.|      .|..|.:|
  Fly   481 LLAAGLEEFKECMTKQND 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 7/21 (33%)
Cpr64AcNP_647874.1 Chitin_bind_4 92..144 CDD:459790
Blue background indicates that the domain is not in the aligned region.

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