DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr49Ae

DIOPT Version :9

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_610774.3 Gene:Cpr49Ae / 36351 FlyBaseID:FBgn0033728 Length:134 Species:Drosophila melanogaster


Alignment Length:127 Identity:42/127 - (33%)
Similarity:65/127 - (51%) Gaps:15/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NFIVALAVLQVQAGSSYIPD-SDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGL------- 62
            ||.:.|....:.:.....|. ::.....:..:..:|.||.|.|||||:|||.|.:.|.       
  Fly     3 NFALCLLATALMSCCQAAPQKAEEPIAIISQESNIEPDGSYNYAYETANGIKAEETGTLKKATSP 67

  Fly    63 ---GGVAVQGGSSYTSPEGEVISVNYVA-DEFGYHPVGAHI---PQVPDYILRSLEYIRTHP 117
               ..:..:|..|||||||.:|::||.| ||.|:.|.|.|:   |.:|..|.::|:|:.:.|
  Fly    68 DSSDVIIARGSVSYTSPEGNLITLNYSADDENGFQPQGDHLPTPPPIPPAIQKALDYLLSLP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 25/57 (44%)
Cpr49AeNP_610774.3 Chitin_bind_4 43..101 CDD:278791 25/57 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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