DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr49Ab

DIOPT Version :9

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_610769.1 Gene:Cpr49Ab / 36345 FlyBaseID:FBgn0050042 Length:259 Species:Drosophila melanogaster


Alignment Length:94 Identity:31/94 - (32%)
Similarity:49/94 - (52%) Gaps:11/94 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LQNDLQVERDGKYRYAYETSNGISASQEGL-------GGVAVQGGSSYTSPEGEVISVNYVADEF 90
            ::.:..||.|| |.|.:||.|||...:.|.       .|:..:|...||.|:|.:..|:||||:.
  Fly   162 IRQEDDVEVDG-YHYLWETENGILGEESGRIEKLTEEEGLRSKGFYEYTGPDGILYRVDYVADDN 225

  Fly    91 GYHPVGAHIPQV---PDYILRSLEYIRTH 116
            |:.|..||:|..   |.|:.:.|.::..:
  Fly   226 GFVPSAAHLPTAPPPPPYVEKLLAFLEAN 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 19/53 (36%)
Cpr49AbNP_610769.1 Chitin_bind_4 173..227 CDD:278791 19/53 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439135
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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