DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcp and LOC3290498

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_551138.3 Gene:LOC3290498 / 3290498 VectorBaseID:AGAMI1_002435 Length:510 Species:Anopheles gambiae


Alignment Length:146 Identity:34/146 - (23%)
Similarity:56/146 - (38%) Gaps:31/146 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QVERDGKYRYAYETSNGIS----ASQEGLGGVAVQGGSSYTSPEGEVISVNYVADEF-GYHPVGA 97
            :.:.:.:|.::|..|:.::    :.||...|..|||..|...|:|...:|:|.||.. |::.|  
Mosquito   323 EYDANPQYSFSYGISDALTGDSKSQQESRSGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAV-- 385

  Fly    98 HIPQVPDYILRSLEYIRTHPYQIKDYYTG---ELKTVEHDAAAFNVYTRNIQDHTIPQSRPSTTP 159
                           :|..|...|.....   ..|.:...|.|:......    ||..:.|..| 
Mosquito   386 ---------------VRREPLAAKTIVAAAPVATKVIAQPAVAYAAPVAK----TISYAAPVAT- 430

  Fly   160 KTIYLTHPPTTTSRPL 175
            || |:..|..:.:.||
Mosquito   431 KT-YVAQPALSYAAPL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 16/51 (31%)
LOC3290498XP_551138.3 None

Return to query results.
Submit another query.