DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and CG15756

DIOPT Version :9

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_572895.1 Gene:CG15756 / 32308 FlyBaseID:FBgn0030493 Length:298 Species:Drosophila melanogaster


Alignment Length:203 Identity:45/203 - (22%)
Similarity:71/203 - (34%) Gaps:59/203 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEG----LGG---VAVQGG 70
            |:.||..|    .::.:.|.:.:..|...||:|.:.|:..||.:..:..    :|.   :|.:|.
  Fly    80 VVVVQKPS----HTETSPRLVDSFDQRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGY 140

  Fly    71 SSYTSPEGEVISVNYVADEFGYH----PVGAHIPQVPDYILRSLEYIRTHPYQIKDYYTG----- 126
            .|...|..:..:|.|.||..|||    .:....|.:|    ||||.    |...:|..:|     
  Fly   141 YSVPLPNDKYSTVFYTADHRGYHVDMQTLSVEQPLLP----RSLEV----PGVERDVGSGMGMGT 197

  Fly   127 ----------------------------ELKTVEHDAAAFNVYTR---NIQDHTIPQSRPSTTPK 160
                                        |.:.|:.|..|.:..|.   |..:....::.|||...
  Fly   198 GIATGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVNQVETETEPSTLAN 262

  Fly   161 TIYLTHPP 168
            .|..|..|
  Fly   263 DILATGAP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 13/53 (25%)
CG15756NP_572895.1 Chitin_bind_4 108..162 CDD:278791 13/53 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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