DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr11A

DIOPT Version :9

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_572803.1 Gene:Cpr11A / 32198 FlyBaseID:FBgn0030394 Length:270 Species:Drosophila melanogaster


Alignment Length:134 Identity:35/134 - (26%)
Similarity:51/134 - (38%) Gaps:21/134 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TRTLQNDLQVERDGKYRYAYETSNGISASQEGL----GGVAVQGGSSYTSPEGEVISVNYVADEF 90
            |.||||   .....|::...:|.|||..|..|.    ....|.|..|:|..:|:.....|.||||
  Fly    61 TETLQN---YNSGKKFKLELKTQNGIEVSSVGKLKDDKTFVVSGSYSFTGADGKRYKTRYTADEF 122

  Fly    91 GYHPVGAHIPQVPDYILRSLEYIRTHPYQIKDYYTGELKTVEHDAAAFNVYTRNIQDHTIPQSRP 155
            ||||:......:|:            |..:..  .|:.:||:..:...|.........|:...:.
  Fly   123 GYHPITELDLDIPE------------PQPLAS--AGQRQTVDPSSLLGNKNRFQFLQQTLDSDQG 173

  Fly   156 STTP 159
            |..|
  Fly   174 SQGP 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 16/50 (32%)
Cpr11ANP_572803.1 Chitin_bind_4 73..124 CDD:278791 16/50 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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