DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr49Ah

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_318986.3 Gene:Cpr49Ah / 1279287 VectorBaseID:AGAMI1_001153 Length:166 Species:Anopheles gambiae


Alignment Length:149 Identity:46/149 - (30%)
Similarity:63/149 - (42%) Gaps:35/149 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LAVLQVQAGSSYIPDSDRNTR-----------TLQNDLQVERDGKYRYAYETSNGI--------- 55
            |.||.:.|.:...|..:.:.|           .|:.|.|...||.||..|:|.|.|         
Mosquito     4 LIVLALVASAYAYPQHEHHERHEHHETTTYIPILKYDKQQGEDGSYRTIYQTGNNIVHEESGYLK 68

  Fly    56 SASQEGLGGVAVQGGS-SYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTH 116
            .||::...|:.||.|: ||.:|.|:||.|.|.|||.|:......:   |.||..|...|      
Mosquito    69 DASEDHPNGILVQQGAYSYEAPNGDVIQVQYTADENGFRVQSDSLPTPPPVPPAIQEGL------ 127

  Fly   117 PYQIKDYYTGELKTVEHDA 135
                |:.|.| :|..|.:|
Mosquito   128 ----KEIYEG-IKRREQEA 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 23/56 (41%)
Cpr49AhXP_318986.3 Chitin_bind_4 49..106 CDD:459790 23/56 (41%)

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