DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and LOC1276938

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_316348.4 Gene:LOC1276938 / 1276938 VectorBaseID:AGAMI1_000807 Length:139 Species:Anopheles gambiae


Alignment Length:107 Identity:25/107 - (23%)
Similarity:45/107 - (42%) Gaps:33/107 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ISVNYVADEFGYH--------PVGAHIPQVPDYILRSLEYIR-THPYQIKDYYTGELKT------ 130
            ::|:....|:|::        ||..|.|.:...:...:.|.: :..|.|||.:||::|:      
Mosquito    12 VAVSASPVEYGHYAPHALVHAPVAVHAPVLKHVVAEPVAYPKYSFNYGIKDPHTGDIKSQAEERD 76

  Fly   131 ----------VEHDAAAFNV-YTRNIQDH-----TIPQSRPS 156
                      ||.|.:...| ||.:  ||     .:.:|.|:
Mosquito    77 GDVVKGQYSLVEPDGSVRTVDYTAD--DHNGFNAVVHKSAPA 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 2/10 (20%)
LOC1276938XP_316348.4 Chitin_bind_4 54..106 CDD:459790 15/53 (28%)

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