DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcp and LOC1276673

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_316043.3 Gene:LOC1276673 / 1276673 VectorBaseID:AGAMI1_011300 Length:101 Species:Anopheles gambiae


Alignment Length:72 Identity:27/72 - (37%)
Similarity:39/72 - (54%) Gaps:11/72 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 TLQNDLQVERDGKYRYAYETSNGISASQEG----LGG-----VAVQGGSSYTSPEGEVISVNYVA 87
            :..||..|  ||.|::|||.|:|....::|    :.|     ::|:|...||...|:...|:|||
Mosquito    27 SFNNDNNV--DGSYQFAYEQSDGQKREEKGELKPVEGSDEPALSVKGSYEYTDSNGQRYRVDYVA 89

  Fly    88 DEFGYHP 94
            ||.||.|
Mosquito    90 DERGYRP 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 19/55 (35%)
LOC1276673XP_316043.3 Chitin_bind_4 38..94 CDD:459790 19/55 (35%)

Return to query results.
Submit another query.