DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and LOC1276146

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_315456.3 Gene:LOC1276146 / 1276146 -ID:- Length:146 Species:Anopheles gambiae


Alignment Length:119 Identity:47/119 - (39%)
Similarity:69/119 - (57%) Gaps:8/119 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FIVALAVLQVQAGS-----SYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGLGGVA 66
            |..||.|..|.||.     |:..:.|.:.:.:..:..::.||.|.::|||||||:|.:||||...
Mosquito     6 FAAALLVATVAAGPLDRAYSHQQNPDAHAQIVAYENVLKDDGHYNWSYETSNGIAAHEEGLGAHN 70

  Fly    67 VQGGSSYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTHP 117
            ..|..|||.|:|.:..|.|||||.|:.|.|.|:   |..|:::.::||.||.:|
Mosquito    71 ANGAFSYTGPDGVLYRVVYVADENGFQPQGDHLPTPPPTPEHVFKTLEQIRANP 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 25/46 (54%)
LOC1276146XP_315456.3 Chitin_bind_4 49..96 CDD:459790 25/46 (54%)

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