DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and LOC1273355

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_312322.1 Gene:LOC1273355 / 1273355 VectorBaseID:AGAMI1_001204 Length:137 Species:Anopheles gambiae


Alignment Length:112 Identity:36/112 - (32%)
Similarity:50/112 - (44%) Gaps:29/112 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLVNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVER--------DGKYRYAYETSNGISASQ 59
            ||...:|..|....|.|:    .:.:|    .||:|..|        || |::.||.|:|...|:
Mosquito    14 LLAGRVVLSAPAPQQGGA----PAGQN----PNDVQTVRYYSENNGLDG-YKFTYELSDGQIRSE 69

  Fly    60 EG------------LGGVAVQGGSSYTSPEGEVISVNYVADEFGYHP 94
            .|            :..:.|||..|:..|:|:...|||.|||.||||
Mosquito    70 VGTYRDVKDAEGKDVKALFVQGSYSFVGPDGQTYWVNYTADENGYHP 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 19/58 (33%)
LOC1273355XP_312322.1 Chitin_bind_4 55..114 CDD:459790 19/58 (33%)

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