DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcp and Cpr62Bc

DIOPT Version :10

Sequence 1:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_308914.4 Gene:Cpr62Bc / 1270234 VectorBaseID:AGAMI1_001634 Length:212 Species:Anopheles gambiae


Alignment Length:195 Identity:45/195 - (23%)
Similarity:67/195 - (34%) Gaps:57/195 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDG------KYRYAY----ETSNGISASQEGL 62
            :|.||||.| |.:..:|            |..|..|      ||.|.|    ..:..:.:..|..
Mosquito     7 LVCLAVLGV-AAAGVVP------------LATEYQGDYYAHPKYSYNYGVHDSLTGDVKSQVESR 58

  Fly    63 GGVAVQGGSSYTSPEGEVISVNYVADEF-GYHPV------GAHIPQVPDYILRSLEYIRTHPYQI 120
            .|..|:|..|...|:|.|.:|:|.||:. |::.|      ..|...|..:...::          
Mosquito    59 DGDVVKGQYSLVEPDGSVRTVDYTADDVNGFNAVVSKSAPSVHAKTVVAHAAPAV---------- 113

  Fly   121 KDYYTGELKTVEHDAAAFNVYTRNIQDHTIPQSRPSTTPKTIYLTH-PPTTTSRPLRQRRALPTH 184
                      |.|.|.|  ||.    .|..|....|.....:|.:| .|...:.|....:.:.:|
Mosquito   114 ----------VAHAAPA--VYA----SHAAPAVYASHAAPAVYASHAAPAVYAAPAVVAKTVVSH 162

  Fly   185  184
            Mosquito   163  162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 15/51 (29%)
Cpr62BcXP_308914.4 Chitin_bind_4 37..89 CDD:459790 15/51 (29%)

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