DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCDC39 and MLP1

DIOPT Version :9

Sequence 1:NP_852091.1 Gene:CCDC39 / 339829 HGNCID:25244 Length:941 Species:Homo sapiens
Sequence 2:NP_013021.1 Gene:MLP1 / 853970 SGDID:S000001803 Length:1875 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCDC39NP_852091.1 Smc 22..848 CDD:224117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 868..941
MLP1NP_013021.1 Smc <68..320 CDD:224117
Smc 214..1087 CDD:224117
SMC_prok_B 753..>1496 CDD:274008
TPR_MLP1_2 999..1125 CDD:400329
pneumo_PspA 1374..>1673 CDD:411490
PTZ00108 <1526..1838 CDD:240271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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