Sequence 1: | NP_001260173.1 | Gene: | snRNP-U1-70K / 33982 | FlyBaseID: | FBgn0016978 | Length: | 448 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012203.1 | Gene: | SNP1 / 854749 | SGDID: | S000001323 | Length: | 300 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 316 | Identity: | 100/316 - (31%) |
---|---|---|---|
Similarity: | 152/316 - (48%) | Gaps: | 71/316 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKK--SRGYLGVAK--------FMADFEDPKDTPL 55
Fly 56 PKTVETRQERLERRRREKAEQV--AYKLEREIALWDPT---EIKNATEDPFRTLFIARINYDTSE 115
Fly 116 SKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHAD---GKKIDSKRVLVDV 177
Fly 178 ERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSGR-----EDNERERERY--RLERERE------ 229
Fly 230 --DREGPGRGGGSNGLDAR------------PGRGFGA--ERRRSRSRERRDRERD 269 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snRNP-U1-70K | NP_001260173.1 | U1snRNP70_N | 2..92 | CDD:289024 | 25/104 (24%) |
RRM | <97..>179 | CDD:223796 | 30/84 (36%) | ||
RRM_snRNP70 | 101..188 | CDD:240682 | 34/89 (38%) | ||
SNP1 | NP_012203.1 | U1snRNP70_N | 6..95 | CDD:403437 | 24/100 (24%) |
RRM_SNP1_like | 89..201 | CDD:410194 | 44/113 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157346122 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 101 | 1.000 | Inparanoid score | I1450 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1470 |
OMA | 1 | 1.010 | - | - | QHG54339 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005136 | |
OrthoInspector | 1 | 1.000 | - | - | oto99581 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102349 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13952 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1267 |
SonicParanoid | 1 | 1.000 | - | - | X3654 | |
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.880 |