Protein Alignment snRNP-U1-70K and AT5G41690

DIOPT Version :10

• Sequence 1: NP_477205.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_568594.3
• Gene: AT5G41690 / 834172
• AraportID: AT5G41690
• Length: 567
• Species: Arabidopsis thaliana
• Alignment Length: 161
• Identity: 37/161 - (22%)
• Similarity: 67/161 - (41%)
• Gaps: 37/161 - (22%)

  Fly    31 EKKSRGYLGVAKFMADFEDPKDTPLP-------KTVETRQERLERRRREKAEQVAYKLEREIALW 88
            :||:...|...|...|..:.|.|.||       |..:....|||....|:.|:.
plant   126 QKKNGECLDNNKIFLDVANKKATYLPPKYCIDHKVWDKDYRRLESHPIEEDERP----------- 179

  Fly    89 DPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLI-----HDQESGKPKGYAFI 148
                 .|:.|:   .||:|.::..|..|.:   |:|:..:.::|.|     |:   ||..||.|:
plant   180 -----PNSVEE---VLFVANLSPQTKISDI---FDFFNCVGEVVSIRLMVNHE---GKHVGYGFV 230

  Fly   149 EYEHERDMHAAYKHADGKKIDSKRVLVDVER 179
            |:....:...|.::.:|:.:...::.:||.:
plant   231 EFASADETKKALENKNGEYLHDHKIFIDVAK 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_477205.1	U1snRNP70_N	3..92	CDD:432406	15/67 (22%)
		RRM_snRNP70	101..188	CDD:409682	20/84 (24%)
AT5G41690	NP_568594.3	PABP-1234	69..>507	CDD:130689	37/161 (23%)