Sequence 1: | NP_001260173.1 | Gene: | snRNP-U1-70K / 33982 | FlyBaseID: | FBgn0016978 | Length: | 448 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_190636.1 | Gene: | U1-70K / 824230 | AraportID: | AT3G50670 | Length: | 427 | Species: | Arabidopsis thaliana |
Alignment Length: | 410 | Identity: | 167/410 - (40%) |
---|---|---|---|
Similarity: | 228/410 - (55%) | Gaps: | 45/410 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD----TPLPKTVETRQER 65
Fly 66 LERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKK 130
Fly 131 IVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGL 195
Fly 196 GGTRRGGNDVNI---KHSGREDNERERERYRLEREREDREGPGRGGGSNGLDARPGRGFGAERRR 257
Fly 258 SRSRERRDR-ERDRGRGAVASNGRSRSRSRERRKRRAGSRERYDEFDRRDRRDRERERDRDRERE 321
Fly 322 KKKKRSKSRERESSRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGYPTFD 386
Fly 387 YQNATIKREIDD-EDEEKYR 405 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snRNP-U1-70K | NP_001260173.1 | U1snRNP70_N | 2..92 | CDD:289024 | 29/90 (32%) |
RRM | <97..>179 | CDD:223796 | 55/81 (68%) | ||
RRM_snRNP70 | 101..188 | CDD:240682 | 58/86 (67%) | ||
U1-70K | NP_190636.1 | U1snRNP70_N | 40..128 | CDD:403437 | 29/90 (32%) |
RRM_snRNP70 | 137..227 | CDD:409682 | 60/89 (67%) | ||
PRK12678 | 245..>395 | CDD:237171 | 56/180 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I2194 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 261 | 1.000 | Inparanoid score | I971 |
OMA | 1 | 1.010 | - | - | QHG54339 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0005136 | |
OrthoInspector | 1 | 1.000 | - | - | oto3144 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102349 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13952 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3654 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.970 |