Protein Alignment snRNP-U1-70K and AT3G08000

DIOPT Version :10

• Sequence 1: NP_477205.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_187457.1
• Gene: AT3G08000 / 819991
• AraportID: AT3G08000
• Length: 143
• Species: Arabidopsis thaliana
• Alignment Length: 132
• Identity: 31/132 - (23%)
• Similarity: 58/132 - (43%)
• Gaps: 22/132 - (16%)

  Fly    90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
            |....:::..|...|||..:::...|..|:..|..:|.:.::.:.:|:.||:.:|:.|:::..|.
plant    29 PQFCTSSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEG 93

  Fly   155 DMHAAYKHADGKKIDSK--RVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSGREDNER 217
            |..:|....|||.:..:  |:...:||.|                    |..|.:...|:...||
plant    94 DALSAKDAMDGKGLLGRPLRISFALERVR--------------------GGPVVVPRLGKSKRER 138

  Fly   218 ER 219
            ||
plant   139 ER 140

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_477205.1	U1snRNP70_N	3..92	CDD:432406	1/1 (100%)
		RRM_snRNP70	101..188	CDD:409682	22/88 (25%)
AT3G08000	NP_187457.1	RRM	42..124	CDD:440488	22/101 (22%)