Protein Alignment snRNP-U1-70K and srsf2a

DIOPT Version :10

• Sequence 1: NP_477205.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_998547.1
• Gene: srsf2a / 406691
• ZFINID: ZDB-GENE-040426-2706
• Length: 225
• Species: Danio rerio
• Alignment Length: 261
• Identity: 70/261 - (26%)
• Similarity: 101/261 - (38%)
• Gaps: 63/261 - (24%)

  Fly    90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
            |.:::..|     :|.:..:.|.||...|||.||.||.:..:.:..|:.:.:.:|:||:.:..:|
Zfish     7 PPDVEGMT-----SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66

  Fly   155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSGREDNERER 219
            |...|....||..:|.:.:.|.:.|                              .||..:....
Zfish    67 DAEDAMDAMDGALLDGRELRVQMAR------------------------------YGRPPDAHYS 101

  Fly   220 ERYRLEREREDREGPGRGGGSNGLDARPGRGFGAERRRSRSRERRDRERDRGRGAVASNGRSRSR 284
            .|                       ..|.|.:|...||||||..|.|:..|.|....|..|||||
Zfish   102 RR-----------------------GAPPRRYGGYGRRSRSRSPRRRKHSRSRSRSRSRSRSRSR 143

  Fly   285 SRERRKR-----RAGSRERYDEFDRRDRRDRERERDRDREREKKKKRSKSRERESSRERRERKRE 344
            ||..|.|     |:.||.|.....|..||.:.:...|.|.|.|.|..|:||...|::..:.|.|.
Zfish   144 SRYSRSRSRSYSRSRSRSRSRSKTRTPRRSKSKSPSRSRSRSKSKSHSRSRTPRSNKGSKSRSRS 208

  Fly   345 R 345
            |
Zfish   209 R 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_477205.1	U1snRNP70_N	3..92	CDD:432406	1/1 (100%)
		RRM_snRNP70	101..188	CDD:409682	23/86 (27%)
srsf2a	NP_998547.1	RRM_SRSF2_SRSF8	16..88	CDD:409751	21/71 (30%)