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Protein Alignment snRNP-U1-70K and Tial1
DIOPT Version :9
Sequence 1: | NP_001260173.1 |
Gene: | snRNP-U1-70K / 33982 |
FlyBaseID: | FBgn0016978 |
Length: | 448 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001013211.1 |
Gene: | Tial1 / 361655 |
RGDID: | 1595845 |
Length: | 392 |
Species: | Rattus norvegicus |
Alignment Length: | 190 |
Identity: | 39/190 - (20%) |
Similarity: | 77/190 - (40%) |
Gaps: | 29/190 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRREK 73
:|.||:...|......:.:.|..::....:|.:.......||. ..||..: .|:.
Rat 25 ILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPY-----CFVEFYE------HRDA 78
Fly 74 AEQVAYK-----LEREIAL-W--DPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKK 130
|..:|.. |.:|:.: | .|:..|..|.:.|. :|:..::.:.:...::..|..:|.|..
Rat 79 AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFH-VFVGDLSPEITTEDIKSAFAPFGKISD 142
Fly 131 IVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRR 190
..::.|..:||.|||.|:.:.::.|...|..|..|:.:..::: || .|..|:
Rat 143 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI-------RT--NWATRK 193
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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