Protein Alignment snRNP-U1-70K and usp101

DIOPT Version :9

• Sequence 1: NP_001260173.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_593779.1
• Gene: usp101 / 2542461
• PomBaseID: SPAC19A8.13
• Length: 261
• Species: Schizosaccharomyces pombe
• Alignment Length: 291
• Identity: 110/291 - (37%)
• Similarity: 159/291 - (54%)
• Gaps: 35/291 - (12%)

  Fly     1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFM--ADFEDPKDTPLPKTVETRQ 63
            |.:.||..||||||.|.|:.::||:|..|.::.:....|:||::  |...|.:..|    .|:.:
pombe     1 MAEKLPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLKYAQSHDQQYHP----TESLE 61

  Fly    64 ERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPI 128
            |:..|.|.||.:|...:|...|.:|||...::...||::|:|::|::|||.||.:.|||..||||
pombe    62 EKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGPI 126

  Fly   129 KKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGG 193
            ::|.::.::.:||..||||:.:|.|||:..|||.:.|..::.:|::|||||.|||||||||:|||
pombe   127 ERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVDVERGRTVKGWLPRKLGG 191

  Fly   194 GLGGTRRGGNDVNIKHSGREDNERER-ERYRLEREREDREGPGRGGGSNGLDARPGRGFGAERRR 257
            ||||          :|..:|...||| .|:|       .:...|||...|.....|.|    .|.
pombe   192 GLGG----------RHYTKERPRRERGSRFR-------GDSGFRGGYRGGFRKSSGGG----SRF 235

  Fly   258 SRSRERRDRERDRGRGAVASNGRSRSRSRER 288
            .|...|.....|.|       ||..|..|.|
pombe   236 GRGPTRSSHSSDYG-------GRDSSPKRRR 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_001260173.1	U1snRNP70_N	2..92	CDD:289024	32/91 (35%)
		RRM	<97..>179	CDD:223796	36/81 (44%)
		RRM_snRNP70	101..188	CDD:240682	42/86 (49%)
usp101	NP_593779.1	RRM	1..>215	CDD:223796	94/234 (40%)
		U1snRNP70_N	2..89	CDD:289024	31/90 (34%)
		RRM_snRNP70	99..188	CDD:240682	44/88 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	73	1.000	Domainoid score	I2570
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I1115
OMA	1	1.010	-	-		QHG54339
OrthoFinder	1	1.000	-	-		FOG0005136
OrthoInspector	1	1.000	-	-		oto101210
orthoMCL	1	0.900	-	-		OOG6_102349
Panther	1	1.100	-	-	LDO	PTHR13952
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1267
SonicParanoid	1	1.000	-	-		X3654
TreeFam	0	0.000	Not matched by this tool.
	11	11.000