Protein Alignment snRNP-U1-70K and Tia1

DIOPT Version :9

• Sequence 1: NP_001260173.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_035715.1
• Gene: Tia1 / 21841
• MGIID: 107914
• Length: 386
• Species: Mus musculus
• Alignment Length: 75
• Identity: 23/75 - (30%)
• Similarity: 38/75 - (50%)
• Gaps: 2/75 - (2%)

  Fly   102 RTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGK 166
            :||::..::.|.:|:.:.:.|...||.|...:|.|.....|  |.|:|:...|...||....:|:
Mouse     7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP--YCFVEFHEHRHAAAALAAMNGR 69

  Fly   167 KIDSKRVLVD 176
            ||..|.|.|:
Mouse    70 KIMGKEVKVN 79

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_001260173.1	U1snRNP70_N	2..92	CDD:289024
		RRM	<97..>179	CDD:223796	23/75 (31%)
		RRM_snRNP70	101..188	CDD:240682	23/75 (31%)
Tia1	NP_035715.1	ELAV_HUD_SF	6..280	CDD:273741	23/75 (31%)
		RRM1_TIA1	8..81	CDD:241059	23/74 (31%)
		RRM2_TIA1	105..184	CDD:241062
		RRM3_TIA1	214..287	CDD:241065
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	355..376

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910