Protein Alignment snRNP-U1-70K and sup-12

DIOPT Version :9

• Sequence 1: NP_001260173.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_508674.1
• Gene: sup-12 / 180674
• WormBaseID: WBGene00006321
• Length: 248
• Species: Caenorhabditis elegans
• Alignment Length: 71
• Identity: 22/71 - (30%)
• Similarity: 36/71 - (50%)
• Gaps: 4/71 - (5%)

  Fly   101 FRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKH--- 162
            |..:|:..:.|.||:..|...||.:|.|::.|:|.|:.:.|.:||.|:..:.......|.|.
 Worm    34 FTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNP 98

  Fly   163 -ADGKK 167
             .||:|
 Worm    99 IIDGRK 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_001260173.1	U1snRNP70_N	2..92	CDD:289024
		RRM	<97..>179	CDD:223796	22/71 (31%)
		RRM_snRNP70	101..188	CDD:240682	22/71 (31%)
sup-12	NP_508674.1	RRM_RBM24_RBM38_like	35..110	CDD:240830	21/70 (30%)
		ELAV_HUD_SF	<37..>209	CDD:273741	21/68 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1267
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030