Protein Alignment snRNP-U1-70K and tiar-1

DIOPT Version :9

• Sequence 1: NP_001260173.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 134
• Identity: 32/134 - (23%)
• Similarity: 54/134 - (40%)
• Gaps: 25/134 - (18%)

  Fly    81 LEREIAL-W--DP--TEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESG 140
            |:||:.: |  :|  .:.|..|...|. :|:..::.:....|||..|:.:|.:....:|.|..:.
 Worm   110 LDREMKVNWAVEPGQQQSKIDTTRHFH-VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 173

  Fly   141 KPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDV 205
            |.|||.|:.|....:...|.:..:|:                   ||.||.......||:.|:..
 Worm   174 KSKGYGFVSYPKREEAERAIEQMNGQ-------------------WLGRRTIRTNWATRKPGDQE 219

  Fly   206 NIKH 209
            ...|
 Worm   220 KPSH 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_001260173.1	U1snRNP70_N	2..92	CDD:289024	5/15 (33%)
		RRM	<97..>179	CDD:223796	18/81 (22%)
		RRM_snRNP70	101..188	CDD:240682	18/86 (21%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	32/134 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910