Protein Alignment snRNP-U1-70K and LOC1280439

DIOPT Version :10

• Sequence 1: NP_477205.1
• Gene: snRNP-U1-70K / 33982
• FlyBaseID: FBgn0016978
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: XP_320292.4
• Gene: LOC1280439 / 1280439
• VectorBaseID: AGAMI1_000289
• Length: 209
• Species: Anopheles gambiae
• Alignment Length: 215
• Identity: 66/215 - (30%)
• Similarity: 99/215 - (46%)
• Gaps: 30/215 - (13%)

  Fly    41 AKFMADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLF 105
            :|::.|..||...   .:::...:....|...:|....|:..|::           ..:|..|:|
Mosquito    14 SKYVCDVYDPVQV---GSIDGTDQVPHDRALIRAINSNYRPNRKV-----------KGNPLHTIF 64

  Fly   106 IARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDS 170
            |.|:.:..:|.:||.:|..:|.|....|:.|..:|.|:|||||||....:...|.:...|..||.
Mosquito    65 IGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYSARGEALRAIERMHGVTIDG 129

  Fly   171 KRVLVDVERARTVKGWLPRRLGGGLGGTR-----RGGNDVN-----IKHSGREDNERERERYRLE 225
            |.:|||.|..|.::||.|||||||.||.:     |.|..|.     |..:|...:..|..|
Mosquito   130 KEILVDEEWERRLEGWKPRRLGGGFGGRKKSQQLRFGCKVQPFRRPILETGGVASVSEWNR---- 190

  Fly   226 REREDREGPGRGGGSNGLDA 245
            |.|:.:|||  .|.|...|:
Mosquito   191 RVRQRKEGP--TGSSRNSDS 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-70K	NP_477205.1	U1snRNP70_N	3..92	CDD:432406	8/50 (16%)
		RRM_snRNP70	101..188	CDD:409682	33/86 (38%)
LOC1280439	XP_320292.4	None