DRSC/TRiP Functional Genomics Resources

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Protein Alignment smt3 and AT5G48710

DIOPT Version :9

Sequence 1:NP_001303312.1 Gene:smt3 / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_001318763.1 Gene:AT5G48710 / 834929 AraportID:AT5G48710 Length:114 Species:Arabidopsis thaliana


Alignment Length:94 Identity:33/94 - (35%)
Similarity:49/94 - (52%) Gaps:4/94 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDEKKG--GETEHINLKVLGQDNAVVQ-FKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPI 62
            |..:|:.  .:..|:.|||.|||....: |.::::..|.|:|..|....|:.....||.|||..|
plant    14 MEGQKRKVVSDPTHVTLKVKGQDEEDFRVFWVRRNAKLLKMMELYTKMRGIEWNTFRFLFDGSRI 78

  Fly    63 NENDTPTSLEMEEGDTIE-VYQQQTGGAP 90
            .|..||..||.::||.|: :..||:|..|
plant    79 REYHTPDELERKDGDEIDAMLCQQSGFGP 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smt3NP_001303312.1 Ubl_SUMO2_3_4 12..83 CDD:340532 27/72 (38%)
AT5G48710NP_001318763.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1583700at2759
OrthoFinder 1 1.000 - - FOG0000413
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10562
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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