DRSC/TRiP Functional Genomics Resources

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Protein Alignment smt3 and Sumo2

DIOPT Version :9

Sequence 1:NP_001303312.1 Gene:smt3 / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_598278.1 Gene:Sumo2 / 690244 RGDID:621761 Length:95 Species:Rattus norvegicus


Alignment Length:93 Identity:66/93 - (70%)
Similarity:77/93 - (82%) Gaps:5/93 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDE--KKGGETE---HINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
            |:||  |:|.:||   ||||||.|||.:|||||||:||||.|||.|||:|.||||:.:|||||||
  Rat     1 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQ 65

  Fly    61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
            ||||.|||..||||:.|||:|:||||||
  Rat    66 PINETDTPAQLEMEDEDTIDVFQQQTGG 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smt3NP_001303312.1 Ubl_SUMO2_3_4 12..83 CDD:340532 53/70 (76%)
Sumo2NP_598278.1 Ubl_SUMO2_3_4 17..88 CDD:340532 53/70 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341316
Domainoid 1 1.000 112 1.000 Domainoid score I6042
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4499
OMA 1 1.010 - - QHG54171
OrthoDB 1 1.010 - - D1583700at2759
OrthoFinder 1 1.000 - - FOG0000413
OrthoInspector 1 1.000 - - otm46452
orthoMCL 1 0.900 - - OOG6_100654
Panther 1 1.100 - - LDO PTHR10562
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X327
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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