DRSC/TRiP Functional Genomics Resources

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Protein Alignment smt3 and Sumo4

DIOPT Version :9

Sequence 1:NP_001303312.1 Gene:smt3 / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:XP_002729504.1 Gene:Sumo4 / 682787 RGDID:1595256 Length:95 Species:Rattus norvegicus


Alignment Length:93 Identity:63/93 - (67%)
Similarity:76/93 - (81%) Gaps:5/93 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDE--KKGGETE---HINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
            |:||  |:|.:||   |||||.:|||.:|||||||:||||.|||.|||:|.||||:.:||.||||
  Rat     1 MADEKPKEGVKTENNDHINLKAVGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFEFDGQ 65

  Fly    61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
            ||||.|||..||||:.|||:|::|||||
  Rat    66 PINETDTPAQLEMEDEDTIDVFRQQTGG 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smt3NP_001303312.1 Ubl_SUMO2_3_4 12..83 CDD:340532 51/70 (73%)
Sumo4XP_002729504.1 Sumo 7..93 CDD:176359 58/85 (68%)
UBQ 18..86 CDD:214563 49/67 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341318
Domainoid 1 1.000 112 1.000 Domainoid score I6042
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4499
OMA 1 1.010 - - QHG54171
OrthoDB 1 1.010 - - D1583700at2759
OrthoFinder 1 1.000 - - FOG0000413
OrthoInspector 1 1.000 - - otm46452
orthoMCL 1 0.900 - - OOG6_100654
Panther 1 1.100 - - O PTHR10562
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X327
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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