DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sumo and Rad60

DIOPT Version :10

Sequence 1:NP_477411.1 Gene:Sumo / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_651134.1 Gene:Rad60 / 42748 FlyBaseID:FBgn0039065 Length:424 Species:Drosophila melanogaster


Alignment Length:76 Identity:19/76 - (25%)
Similarity:34/76 - (44%) Gaps:25/76 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QFKIK------KH---TPLRKLMN-----------AYCDRAGLSMQVVRFRFDGQPINENDTPTS 70
            :|::|      ||   .|::|..|           ..||     .:.::..|||..::.||||.:
  Fly   350 KFQVKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCD-----PRTIKLFFDGDLLDPNDTPNN 409

  Fly    71 LEMEEGDTIEV 81
            .:||..:.|::
  Fly   410 QDMEGNEVIDL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SumoNP_477411.1 Ubl_SUMO2_3_4 12..83 CDD:340532 19/76 (25%)
Rad60NP_651134.1 Ubl1_cv_Nsp3_N-like 254..315 CDD:475130
Ubl_SUMO_like 350..419 CDD:340462 18/73 (25%)
Blue background indicates that the domain is not in the aligned region.

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