DRSC/TRiP Functional Genomics Resources

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Protein Alignment smt3 and Sumo1

DIOPT Version :9

Sequence 1:NP_001303312.1 Gene:smt3 / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_001009672.1 Gene:Sumo1 / 301442 RGDID:1306919 Length:101 Species:Rattus norvegicus


Alignment Length:88 Identity:46/88 - (52%)
Similarity:62/88 - (70%) Gaps:3/88 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINEN 65
            :.|:|:|   |:|.|||:|||::.:.||:|..|.|:||..:||.|.|:.|..:||.|:||.|.:|
  Rat    13 LGDKKEG---EYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADN 74

  Fly    66 DTPTSLEMEEGDTIEVYQQQTGG 88
            .||..|.|||.|.|||||:||||
  Rat    75 HTPKELGMEEEDVIEVYQEQTGG 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smt3NP_001303312.1 Ubl_SUMO2_3_4 12..83 CDD:340532 36/70 (51%)
Sumo1NP_001009672.1 Ubl_SUMO1 21..96 CDD:340531 39/74 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54171
OrthoDB 1 1.010 - - D1583700at2759
OrthoFinder 1 1.000 - - FOG0000413
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100654
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X327
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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