DRSC/TRiP Functional Genomics Resources

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Protein Alignment smt3 and F28A10.1

DIOPT Version :9

Sequence 1:NP_001303312.1 Gene:smt3 / 33981 FlyBaseID:FBgn0264922 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_493824.2 Gene:F28A10.1 / 185027 WormBaseID:WBGene00017869 Length:308 Species:Caenorhabditis elegans


Alignment Length:74 Identity:20/74 - (27%)
Similarity:32/74 - (43%) Gaps:14/74 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDEKKG-------GETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQV---VRFR 56
            |.|||.       ..|:|:....| |::..|::.|   .|:||..|......|:...:   |:|:
 Worm    80 SFEKKSRACDHDTNVTQHLRAIPL-QNSDEVKYAI---LPVRKTPNDVFVTLGIGQDINAEVKFQ 140

  Fly    57 FDGQPINEN 65
            .:.|.|..|
 Worm   141 KEMQNIGLN 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smt3NP_001303312.1 Ubl_SUMO2_3_4 12..83 CDD:340532 15/57 (26%)
F28A10.1NP_493824.2 Methyltransf_21 <138..301 CDD:377448 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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