DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgcl and LYS21

DIOPT Version :10

Sequence 1:NP_609089.1 Gene:Hmgcl / 33978 FlyBaseID:FBgn0031877 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_010151.1 Gene:LYS21 / 851425 SGDID:S000002289 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:276 Identity:60/276 - (21%)
Similarity:115/276 - (41%) Gaps:56/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALTAKRTAVT-------------SAANQVRIVEVGPRDGLQNEPKLLPAATKIELINQLSETGLR 62
            ::|...||.|             |.....::::...|:|.|..........|||:...|.:.|:.
Yeast     9 SVTESTTAPTTSNPYGPNPADYLSNVKNFQLIDSTLREGEQFANAFFDTEKKIEIARALDDFGVD 73

  Fly    63 TIEATSFVSAKW-------VPQMGDNAEVLKGIRKVTGISYPVLTPNLKGFESALEAGAEEVAVF 120
            .||.||.|:::.       :.::|..|::|..||           .::.....|:|.|.:.|.|.
Yeast    74 YIELTSPVASEQSRKDCEAICKLGLKAKILTHIR-----------CHMDDARVAVETGVDGVDVV 127

  Fly   121 GAASDAFSL----KNVNCTAAEAIERFKPVLKAAQKHGVRVR-----GYVSTVVGCPYEGAVAPS 176
            ...|.....    |::|..|..|:|    |::..:..|:.:|     .:.|.:|.          
Yeast   128 IGTSKFLRQYSHGKDMNYIAKSAVE----VIEFVKSKGIEIRFSSEDSFRSDLVD---------- 178

  Fly   177 AVVKVVEALYQMGCYEISLGDTIGVGTPGTMRRMLDEVTKVVPAKDLAVHCHDTYGQALSNILVS 241
             ::.:.:.:.::|...:.:.||:|...|..:..::..:..||.. |:..|.|:..|.|::|...:
Yeast   179 -LLNIYKTVDKIGVNRVGIADTVGCANPRQVYELIRTLKSVVSC-DIECHFHNDTGCAIANAYTA 241

  Fly   242 LDYGIRVVDSSVSGLG 257
            |:.|.|::|.||.|:|
Yeast   242 LEGGARLIDVSVLGIG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgclNP_609089.1 DRE_TIM_HMGL 28..300 CDD:163676 55/246 (22%)
LYS21NP_010151.1 DRE_TIM_HCS 37..298 CDD:163685 55/248 (22%)

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