DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgcl and MAML-4

DIOPT Version :10

Sequence 1:NP_609089.1 Gene:Hmgcl / 33978 FlyBaseID:FBgn0031877 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_173285.2 Gene:MAML-4 / 838431 AraportID:AT1G18500 Length:631 Species:Arabidopsis thaliana


Alignment Length:314 Identity:71/314 - (22%)
Similarity:135/314 - (42%) Gaps:64/314 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SAANQVRIVEVGPRDGLQNEPKLLPAATKIELINQLSETGLRTIEATSFVSAKWVPQMGDNAEVL 85
            |..|.||:.:...|||.|:....|.:..|:::..||::.|:..|||....::|      |:.|.:
plant    84 SDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK------DDFEAV 142

  Fly    86 KGIRKVTGIS------YPVLTP----NLKGFESALE----AGAEEVAVFGAASDAFSLKNVNCTA 136
            |.|.:..|.:      .||:..    |.|..|.|.:    |....:..|.|.||......:..|.
plant   143 KTIAETVGNTVDENGYVPVICGLSRCNKKDIERAWDAVKYAKRPRIHTFIATSDIHLEYKLKKTK 207

  Fly   137 AEAIERFKPVLKAAQKHGVR------------VRGYVSTVVGCPYEGAVAPSAVVKVVEALYQMG 189
            ||.||..:.:::.|:..|..            .|.|:..::|             :|::|    |
plant   208 AEVIEIARSMVRFARSLGCEDVEFSPEDAGRSEREYLYEILG-------------EVIKA----G 255

  Fly   190 CYEISLGDTIGVGTPGTMRRMLDEVTKVVPAKD---LAVHCHDTYGQALSNILVSLDYGIRVVDS 251
            ...:::.||:|:..|....:::.::....|..:   ::.||.:..|.:.:|.|.....|.|.::.
plant   256 ATTLNIPDTVGITLPSEFGQLITDLKANTPGIENVVISTHCQNDLGLSTANTLSGAHAGARQMEV 320

  Fly   252 SVSGLGGCPYAKGASGNAATEDVVYLL-----HGM-GLDTGVNLDKLIQVGRYI 299
            :::|:|      ..:|||:.|:||..:     |.: ||.||::...::...:.:
plant   321 TINGIG------ERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgclNP_609089.1 DRE_TIM_HMGL 28..300 CDD:163676 67/307 (22%)
MAML-4NP_173285.2 PLN02321 5..631 CDD:215182 71/314 (23%)

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