DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgcl and hmgcll1

DIOPT Version :9

Sequence 1:NP_001285696.1 Gene:Hmgcl / 33978 FlyBaseID:FBgn0031877 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_017949568.1 Gene:hmgcll1 / 100497263 XenbaseID:XB-GENE-952336 Length:335 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgclNP_001285696.1 HMGL-like 25..299 CDD:279072
DRE_TIM_HMGL 28..300 CDD:163676
hmgcll1XP_017949568.1 PLN02746 24..331 CDD:178347
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 367 1.000 Domainoid score I920
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 380 1.000 Inparanoid score I2017
OMA 1 1.010 - - QHG55007
OrthoDB 1 1.010 - - D1029775at2759
OrthoFinder 1 1.000 - - FOG0002283
OrthoInspector 1 1.000 - - otm47701
Panther 1 1.100 - - O PTHR42738
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1709
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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