DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atac1 and RVE8

DIOPT Version :10

Sequence 1:NP_609088.1 Gene:Atac1 / 33977 FlyBaseID:FBgn0031876 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_187571.2 Gene:RVE8 / 820117 AraportID:AT3G09600 Length:298 Species:Arabidopsis thaliana


Alignment Length:177 Identity:44/177 - (24%)
Similarity:70/177 - (39%) Gaps:23/177 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PTLSP-NDEEGGTNETPTDASSWTQEANKNRDRSNGRSENFNRLWTNEEQSRLEQLLIQYPPEEV 155
            |:.:| |.|......|.|||   ..|.:..:.|...........||.||..:..:.|      ::
plant     5 PSRNPTNAEAPPPPPTSTDA---VAEGSSKKVRKPYTITKSRESWTEEEHDKFLEAL------QL 60

  Fly   156 EMRRFGKIAKALGNRTAQQVYSRVQKYFQKLHDAGM------PVPGRIPKHRRP--GLSKPKIKL 212
            ..|.:.||...:|::|..|:.|..||||.|:...|.      |.|.|...|..|  .....::.|
plant    61 FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMPL 125

  Fly   213 RKSTFFPAHNISLQMPE----DDFTFDDLRIPSPASDMLLMPASKIE 255
            :.||.|.... :..||.    ||.:....|:.||..::..:..::.:
plant   126 QVSTSFTTTR-NGDMPGYASWDDASMLLNRVISPQHELATLRGAEAD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atac1NP_609088.1 SANT 135..183 CDD:238096 14/47 (30%)
RVE8NP_187571.2 myb_SHAQKYF 41..91 CDD:130620 16/55 (29%)
COG5114 44..>150 CDD:227445 31/112 (28%)

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