DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3430 and mcmbp

DIOPT Version :10

Sequence 1:NP_542438.1 Gene:CG3430 / 33976 FlyBaseID:FBgn0031875 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_997743.1 Gene:mcmbp / 321119 ZFINID:ZDB-GENE-030131-9676 Length:631 Species:Danio rerio


Alignment Length:644 Identity:234/644 - (36%)
Similarity:349/644 - (54%) Gaps:73/644 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPCAMELPSTP----DELAAQQADS--------AALKDLLK--DPSRWHSIPLLNYTPLHKLKDQ 51
            ||...:..:.|    |.|.||...|        ...|:.||  |...|  :|.||..|||.||..
Zfish     1 MPTTHDWINNPLGVVDGLFAQSNSSPDWEKKVVEYFKEKLKLNDAHTW--VPSLNDVPLHYLKPN 63

  Fly    52 TLVRFRGMIQDMMDPEIYLERYEVKS-ADGSKRVQEGKYRDCLKIANGEVIDYNADGNVHGERRT 115
            :||:||.|:|||.|||.::..||:.. ...||:|:.|||:|..:...   :|:|:...|..||:|
Zfish    64 SLVKFRCMVQDMFDPEFFMGVYEMNDPTSNSKQVKCGKYKDVTECGQ---VDFNSRNTVTSERQT 125

  Fly   116 MFVVSVPGLNDWSKEHEKLCCPQIDLASLGQS---PSSA----KKRTIVGEEEAMDV------DV 167
            .:.|.:||.::|.||         ..|...|:   ||::    :.:....|::.||.      |:
Zfish   126 FYCVPIPGESNWVKE---------SYAGTSQARVVPSTSYVPNRHKRSYEEDDEMDTQCQQTKDI 181

  Fly   168 A----------SETTFKRPCLKEIQKDSEPVGASKSSVLGSDYLINSPLPDRPSMACMVKVYEEF 222
            :          ..|..||      |:...|...|.||...|...:|.|||.....||:|||||::
Zfish   182 SQGAQSSTESHGNTEPKR------QETEAPSQDSSSSHCTSSLDLNFPLPGEKGPACLVKVYEDW 240

  Fly   223 DTYQLNSLVDFVGFLSVDASL-------DAATLEIDDCENLS--ELQAAH-PSPFLIPRLHAFGV 277
            |:::||.:::..|.||||.:|       :|::| :|..|.:.  |.|..| |...|:||||....
Zfish   241 DSFKLNDMLEVFGILSVDPALSVIADEREASSL-LDPTEGMETMEEQRVHSPPASLVPRLHMLYA 304

  Fly   278 QVLPHANPLLDKS-LRQPTEICEETYPTHLAVHKDLRMLLKLCLFDDDLAAEYLLSHLISTVYSR 341
            |.|.|.||||..| |....:..........:|..:|.......|..|.||||||:.||||.||||
Zfish   305 QPLAHNNPLLPSSPLENNADYLSCVLGELASVRAELLTFFTHILMGDSLAAEYLILHLISNVYSR 369

  Fly   342 SEMQSIGKFALNLCNLPKNCEAYATKLYQILELLLPASHYMPMTLVTLNTAAFAPKKDYETNKLV 406
            .::..:|||.|||...|.: ..:...|:::::.|:|:|:.:.|:|..:||....|:|||..|:||
Zfish   370 RDVLPLGKFTLNLSGCPLS-SPFTEHLFKVIQQLVPSSYRLSMSLHNMNTQRMVPRKDYTANRLV 433

  Fly   407 SGVLQLAPHTHLVLDETCMQQGKLEANGVHAVQHLAHLINNQELKCDFQYYQIDYQANIPVLVLS 471
            ||.||||.:|.|.||||.::||:|::.||..:..|.:||:.|::..||.|:|:::..||.||:.|
Zfish   434 SGTLQLAKNTSLFLDETQLEQGQLDSTGVRNITALGNLISWQKVDYDFNYHQMEFPCNINVLIAS 498

  Fly   472 EGRSMLPSDFVLPINADSKAVELVDESLKAAHHYLQPSRLQQFRKYLTTARTSGFNVSEEHTEMI 536
            ||||:||||..:.:.|......| :|.|.|......||:|.::|.||:.||...:.:|:|.|:.:
Zfish   499 EGRSLLPSDCQVHLRASLNPPNL-EEYLSAVQVAQVPSQLNKYRVYLSVARALNYTISDEITKAV 562

  Fly   537 QQDFVDMRKANVKS-NADDLHGLLVLSRLLGIARGKDTLDKETWQLATEFEAKRRQRIQ 594
            ::|||||||.:.:| :|:|||.|||::|||.::.|::||.::.|..|.:.||.|..|.|
Zfish   563 EEDFVDMRKDDPQSMSAEDLHRLLVVARLLSLSHGQNTLSRDGWMKAKQLEALRISRTQ 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3430NP_542438.1 MCM_bind 24..590 CDD:462870 223/603 (37%)
mcmbpNP_997743.1 MCM_bind 36..616 CDD:462870 223/602 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..218 15/75 (20%)

Return to query results.
Submit another query.