DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3430 and Mcmbp

DIOPT Version :9

Sequence 1:NP_542438.1 Gene:CG3430 / 33976 FlyBaseID:FBgn0031875 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001034697.2 Gene:Mcmbp / 309009 RGDID:1306730 Length:642 Species:Rattus norvegicus


Alignment Length:665 Identity:236/665 - (35%)
Similarity:349/665 - (52%) Gaps:104/665 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPCAMELPSTPDELAAQQADSAA--------------LKDLLKDPS--RWHSIPLLNYTPLHKLK 49
            |||..:..|.|  |...|...|.              .|:.||:.:  :|  :|.||..|||.||
  Rat     1 MPCGEDWLSHP--LGIVQGFFAQNGVTPDWEKKVIDYFKEKLKENNAPKW--VPSLNEVPLHYLK 61

  Fly    50 DQTLVRFRGMIQDMMDPEIYLERYEVKSADGSKRVQE-GKYRDCLKIANGEVIDYNADGNVHGER 113
            ..:.|:||.|||||.|||.|:..||..:.:...||.. |||||..:....:.:|.|:..:...||
  Rat    62 PNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKARVLHFGKYRDVAECGPQQELDLNSPRSTTSER 126

  Fly   114 RTMFVVSVPGLNDWSKEHEKLCCPQIDLASLGQSPS-----SAKKRTIVGEEEAMDVDVASETTF 173
            :|.:.|.|||.:.|.||      ..::......|||     |..||:...:|   |:|:....  
  Rat   127 QTFYCVPVPGESLWVKE------AYVNANQARVSPSTSYTPSRHKRSYEDDE---DMDLQPNK-- 180

  Fly   174 KRPCLKEIQKDSEPVGASKSSVLG---------------------------SDYLINSPLPDRPS 211
                    |||... ||.::..||                           |.:.:|.|||....
  Rat   181 --------QKDQHS-GARQAGGLGGLHWRGEPKRLETEASSGQQLNSLNLSSPFDLNFPLPGEKG 236

  Fly   212 MACMVKVYEEFDTYQLNSLVDFVGFLSVDASLD---------AATLEIDDCENLSELQAAH-PSP 266
            .||:|||||::|.:::|.:::..|.||||..|.         :|.|:..:|.:::|.|..| |..
  Rat   237 PACLVKVYEDWDCFKVNDVLELYGVLSVDPILSILNNEERDASALLDPMECTDMAEEQRVHSPPA 301

  Fly   267 FLIPRLHAFGVQVLPHANPLLDKSL-RQPTEICE--ETYPTHLA-VHKDLRMLLKLCLFDDDLAA 327
            .|:||:|....|.|.|.||||...| ::.:..|:  ..:.:.|: |..:|...|...|..|.|||
  Rat   302 SLVPRIHVILAQKLQHINPLLPTCLNKEESRTCQFVSNFMSELSPVRAELLGFLTHALLGDSLAA 366

  Fly   328 EYLLSHLISTVYSRSEMQSIGKFALNLCNLPKNCEAYATKLYQILELLLPASHYMPMTLVTLNTA 392
            |||:.|||||||:|.::..:|||.:||...|:| ..:...||:|::.|:|||..:.||:..:|..
  Rat   367 EYLILHLISTVYTRRDVLPLGKFTVNLSGCPQN-STFTEHLYRIIQHLVPASFRLQMTIENMNQL 430

  Fly   393 AFAPKKDYETNKLVSGVLQLAPHTHLVLDETCMQQGKLEANGVHAVQHLAHLINNQELKCDFQYY 457
            ...|.|||..|:||||:|||..:|.||:|||.::||:|:..|||.|..|::||..|::..||.|:
  Rat   431 KLIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVAALSNLITWQKVDYDFSYH 495

  Fly   458 QIDYQANIPVLVLSEGRSMLPSDF-------VLPINADSKAVELVDESLKAAHHYLQPSRLQQFR 515
            |:::..||.||:.|||||:||:|.       ::|.|.:    |.::..|.|    :.||.|.:||
  Rat   496 QMEFPCNINVLITSEGRSLLPADCQIHLQPQLIPPNME----EYMNGLLSA----VLPSVLNKFR 552

  Fly   516 KYLTTARTSGFNVSEEHTEMIQQDFVDMRKANVKS-NADDLHGLLVLSRLLGIARGKDTLDKETW 579
            .|||..|...:|:|::.|:.::.|||:|||.:.:| .|||||.|||::|.|.::.|:.||.:|.|
  Rat   553 IYLTLLRFLDYNLSDDITKAVEDDFVEMRKNDPQSITADDLHQLLVVARFLSLSAGQTTLSRERW 617

  Fly   580 QLATEFEAKRRQRIQ 594
            ..|.:.|..||.|:|
  Rat   618 LRAKQLEHSRRSRLQ 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3430NP_542438.1 MCM_bind 24..590 CDD:286782 224/622 (36%)
McmbpNP_001034697.2 MCM_bind 36..628 CDD:286782 224/622 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..200 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353874
Domainoid 1 1.000 342 1.000 Domainoid score I1044
eggNOG 1 0.900 - - E1_KOG2545
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11749
Inparanoid 1 1.050 343 1.000 Inparanoid score I2264
OMA 1 1.010 - - QHG55744
OrthoDB 1 1.010 - - D1011739at2759
OrthoFinder 1 1.000 - - FOG0006037
OrthoInspector 1 1.000 - - oto98015
orthoMCL 1 0.900 - - OOG6_103417
Panther 1 1.100 - - LDO PTHR13489
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4951
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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