DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3430 and mcb1

DIOPT Version :9

Sequence 1:NP_542438.1 Gene:CG3430 / 33976 FlyBaseID:FBgn0031875 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_593122.1 Gene:mcb1 / 2542796 PomBaseID:SPAC1687.04 Length:501 Species:Schizosaccharomyces pombe


Alignment Length:608 Identity:140/608 - (23%)
Similarity:219/608 - (36%) Gaps:170/608 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 STPDELAAQQADSAALKDLLKDPSRWHSIPLLNYTPL--HKLKDQTLVRFRGMIQDM-MDPEIYL 70
            |.|| |.........:.::.....|...||  ||...  .:||...|:|.:||:||. ...|.:.
pombe    28 SKPD-LQGTLGIDEEVSNIFATEERIRKIP--NYLDCKWSELKTGQLLRLQGMVQDTNFGHEFFA 89

  Fly    71 ERYEVKSADGSKRVQEGKYRDCLKIANGEVIDYNADGNVH--------GERRTMFVVSVPG---- 123
                     |:..|.|..:|.|..|     :|::.| .:|        .||.::|:.:|||    
pombe    90 ---------GAVEVNENIWRGCRYI-----LDFSED-EMHLDESKIVLDERYSLFLTNVPGERTL 139

  Fly   124 -----LNDWSKEHEKLCCPQIDLASLGQSPSSAKKRTIVGEEEAMDVDVASETTFKRPCLKEIQK 183
                 |.:|..|                   |.|:|::                          |
pombe   140 PVIEALGNWGSE-------------------SLKERSL--------------------------K 159

  Fly   184 DSEPVGASKSSVLGSDYLINSPLPDRPSMACMVKVYEEFDT-YQLNSLVDFVGFLSVDASLDAAT 247
            .|..:.||..:                  ...||.|...:| .|:...:|.:|...         
pombe   160 YSNRLQASNDT------------------GVCVKCYGGMETKVQVCQAIDVIGIYE--------- 197

  Fly   248 LEIDDCENLSELQAAHPSPFL--IPRLHAFGVQVLPHANPLLDKSLRQPTEICEETYPTHLAVHK 310
                           .||.:.  :|.||.           |..|...|............:...|
pombe   198 ---------------EPSEYSDGLPILHM-----------LCFKDYTQSATQAPSPQQAEIIRPK 236

  Fly   311 DLRMLLKLCLFDDDLAAEYLLSHLISTVYSRSEMQSIGKFALNLCNLPKNCEA-YATKLYQILEL 374
            .|:...|  :..:::|||.|:..|:|.|..::....||.|.|||    .||.: ..::|..:|..
pombe   237 ILKYFEK--VLGENIAAESLMLALLSNVVHKTTGLVIGGFTLNL----TNCTSELVSQLVSVLRP 295

  Fly   375 LLPASHYMPMTLVTLNTAAFAPKKDYETNKLVSGVLQLAPHTHLVLDETCMQQGKLEANGVHAVQ 439
            |:.......:.:..||.....|..|.||  |.:..||:||.|.:|||||.:..|.|...|...||
pombe   296 LIKRMVIQKVNVAELNRKPLYPLSDGET--LDTSHLQVAPGTLIVLDETELSSGTLNDVGCRNVQ 358

  Fly   440 HLAHLINNQELKCDFQYYQIDYQANIPVLVLSEGRSMLPSDFVLPINADS-KAVELVDESLKAAH 503
            .|:.||:.|:|...:.:......:|:.:::||.|||:||:|.......|| ..:|...:|     
pombe   359 FLSSLISQQDLTFFYPFSSFTVHSNVRIIILSHGRSILPADVGCRCRGDSPDTIEFPTDS----- 418

  Fly   504 HYLQPSRLQQFRKY--LTTARTSGFNVSEEHTEMIQQDFVDMRKANVKSNADDLHGLLVLSRLLG 566
                 ..||:|..:  :...|.   |:.|...:.||..:|..|:.|.:.|...|...:..|||..
pombe   419 -----DELQEFCNFFHMWNMRA---NIPENMLDYIQSTYVSSRQYNKEINEKTLSLQINCSRLYA 475

  Fly   567 IARGKDTLDKETWQLATEFEAKR 589
            .:.|:..:.:      .:|||.|
pombe   476 KSFGRQLVSR------IDFEAAR 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3430NP_542438.1 MCM_bind 24..590 CDD:286782 136/593 (23%)
mcb1NP_593122.1 MCM_bind 44..485 CDD:286782 132/576 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2545
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I1516
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006037
OrthoInspector 1 1.000 - - oto101743
orthoMCL 1 0.900 - - OOG6_103417
Panther 1 1.100 - - LDO PTHR13489
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1826
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.890

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