DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and AT1G18560

DIOPT Version :9

Sequence 1:NP_001285694.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001319034.1 Gene:AT1G18560 / 838437 AraportID:AT1G18560 Length:690 Species:Arabidopsis thaliana


Alignment Length:660 Identity:137/660 - (20%)
Similarity:240/660 - (36%) Gaps:178/660 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KKKSNVWQYFYKTSGTVAT--CLLCNRNYSRRGRGTTCLRNHLKSKHPPEFLSLSGDIKYLDLVK 65
            |..::|:..:::|:....|  |..|.::|| ....|..|..||.::||      ..|....|:|.
plant    51 KTMTSVYLKYFETAPDSKTRKCKFCGQSYS-IATATGNLGRHLTNRHP------GYDKAAADVVT 108

  Fly    66 SEISIGSPQHPTAQLELNLHETDSDPLDTEDISY------------SKRCDEKLALMLLNHSFEF 118
            |.   ..||.|.|.::.:..::....||.:.:::            ....||    ..|.:||:|
plant   109 SS---SVPQTPPAVVKPSQSQSKVPQLDYDHLNWLVLKWLALSSLPPSTVDE----TWLGNSFKF 166

  Fly   119 IEGPGFVNFIRTLQPRYTIQPRSYYEKILCEDIQRKMHQHLKQQVDLLDA-ISLSTSLWRGDKGE 182
                        |:|...:.|...|:.|| :::...|...:|..::.:.: :|::.|.|...:..
plant   167 ------------LKPSIQLWPAEKYKAIL-DEVFTSMRGDVKTTLEHIQSKVSVTLSFWNSYENI 218

  Fly   183 GLLSLSCSGISRDFQTHRLMLKCEALNYES-TSKLACCIRDLVPSLAIEVPKEKIHCVIRDE--- 243
            ..:|::...|..::.:|||:|....:.|.| .|::...:..::.:.|||   ::|.|...|.   
plant   219 FYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIE---DRILCCTHDNSEN 280

  Fly   244 --------------MTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCKQIVDHF-ASSKMA 293
                          ...||.....|:...|...:...|.:   ::.:.||.::..... ||::::
plant   281 AIHACHSLKEYFDGQKVLPFCYIPCAAQTLNDIIDEGLAT---IKPIISKVREFTQELNASTELS 342

  Fly   294 NDHLKFIQEIRLTRDPCTLTPYD-PCQWNSAFQM----------MSSVFRM-KDALS----LYCE 342
            :|   |||.....::.....|.| ..:|:..:||          :.||.|. :|||.    |...
plant   343 DD---FIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKSLDSVIRKNEDALENRMMLSSV 404

  Fly   343 EYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTSSVIPLVAALRDSLRTDVHNFVSSVT 407
            |.:.|.|. ..::::|...|.      |..:.:|...|    :.|.....|       |....:|
plant   405 EKNAVTIV-HNYLDLDSFHKT------TNDMCTNKDLT----VGLALLFMD-------NISEMIT 451

  Fly   408 IC-------SFARKLLEELEMK-----------FAHITSDINFLMATYLDPRYKQAFFTEREEQL 454
            .|       .:.|...|.:..|           |.:||:        .||||.|..:        
plant   452 TCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITA--------ILDPRIKTEY-------- 500

  Fly   455 VANEVLLQLAGVPEDCNGQPPLKIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQP-------- 511
                       :||..|         :.|...:.....|.:...|..|:..|:..:|        
plant   501 -----------IPETIN---------LESYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGG 545

  Fly   512 NTSM----------GSQS-QIKNLLYLYNSEPRIDRNMDPLIWWRSNI-KYISLYGIVRKFLSAP 564
            |.|.          ||.| .:.:.|..|.||..:....|.|.||:.|. :|..|..:.|.||:..
plant   546 NISFAEEIARRKRRGSMSNNVVDELTQYLSESIVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQ 610

  Fly   565 AASVVSEGLF 574
            |.|...|.:|
plant   611 ATSAAPEEIF 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_001285694.1 zf-BED 6..48 CDD:280965 11/43 (26%)
Dimer_Tnp_hAT 525..603 CDD:283379 18/51 (35%)
AT1G18560NP_001319034.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I2497
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.830

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