DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and Zbed4

DIOPT Version :9

Sequence 1:NP_001285694.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001128272.1 Gene:Zbed4 / 315211 RGDID:1305949 Length:1170 Species:Rattus norvegicus


Alignment Length:679 Identity:153/679 - (22%)
Similarity:277/679 - (40%) Gaps:152/679 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKKKSNVWQYF--YKTSGTVATCLLCNRNYSRRGR----GTTCLRNHLKSKHPPEFLSLSGDIKY 60
            |||.|.:|.:|  .....|...||.|.|..||..:    ||:||..||:..|        |.:  
  Rat   558 SKKTSKLWNHFSICSADSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFH--------GHV-- 612

  Fly    61 LDLVKSEISIGS-PQHPTAQLELNLHETDSDPL--DTEDISYSKRCDEKLALMLLN------HSF 116
               :|:::|..: |..|..:..|.:..:.:..|  .||....|....:|:..::..      ..:
  Rat   613 ---LKNDVSEATLPHSPGIRRPLGMELSGASSLRDSTEKFYDSHPVAKKITSLIAEMIALDLQPY 674

  Fly   117 EFIEGPGFVNFIRTLQPRYTIQPRSYYEKI----LCEDIQRKMHQHLKQQVDLLDAISLSTSLWR 177
            ..::..||...:..|:|:|::...||:.:.    :.:::::.:..|||:...  ..:..::.:|.
  Rat   675 SLVDNVGFNRLLEYLKPQYSLPSPSYFSRTAIPGMYDNVKQIIMSHLKEAES--GVVHFTSGIWM 737

  Fly   178 GDKGEGLLSLS------CSGISRDFQTHRLMLKCEAL--------NYESTS---KLACCIRDLVP 225
            ..:....|:|:      .|.:....:.|.    |.||        :|...|   :|.|.....|.
  Rat   738 SSQTREYLTLTAHWVTFASAVRPHCEDHH----CSALLDVSQIDCDYSGNSIQKQLECWWEAWVT 798

  Fly   226 SLAIEVPKEKIHCVIRDE------MTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCKQIV 284
            |:.::     |...:.|.      ::....|...|..|.:.:.|..|::|..::|||.|..:::.
  Rat   799 SIGLQ-----IGITVTDNPSIGKMLSEGEHSSVQCFSHTVNLIVSEAIKSQRMVQNLLSIARKLC 858

  Fly   285 DHFASSKMANDHLKFIQ------EIRLTRDPCTLTPYDPCQWNSAFQMMSSVFRMKDA---LSLY 340
            :....|..|.:.|..:|      :.:|.:|.       |.:|:::|.|:..:...|.|   :|:.
  Rat   859 ERVHRSPRAREKLAELQREYELPQHQLIQDV-------PSKWSTSFHMLERLIEQKRAVNEVSIE 916

  Fly   341 CEEYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTSSVIPLVAALRDSLRTDVHNFVSS 405
            |....|:..  |:|..:.....|::|.:...:..|...:|.|.|||::..|  |.:.:: .|..:
  Rat   917 CNFRELISC--DQWEVMQSVCHVLRPFDAASREMSAHMSTLSQVIPMIHIL--SRKVEM-LFGET 976

  Fly   406 VTICSFARKLLEELEMKFAHITSDINFLMATYLDPRYKQAFFTEREEQLVANEVLLQLA---GVP 467
            :.|.:..:.|.|.:..:.:....|..::.||.||||||.:.|||.|.:....:::.:|.   ...
  Rat   977 MGIDTMLKSLKEAMASRLSATLHDPRYIFATLLDPRYKASLFTEEEAEQYRQDLIRELEILNSTS 1041

  Fly   468 ED------CNGQPPLKIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIK---- 522
            ||      |:...|||                        .|||      ..|:.|.:.||    
  Rat  1042 EDTAASNGCDSGSPLK------------------------DTGT------EESLWSLAPIKRDQR 1076

  Fly   523 -----NLLYLYNSEPRIDRNMDPLIWWRSNIKYISLYG---IVRKFLSAPAASVVSEGLFRKSTH 579
                 :::..|..|..::.:.|||.:|  |:|..|..|   :..:||..|.::|.||.||  || 
  Rat  1077 EKLPEDMVLAYLEEEVLEHSCDPLAYW--NLKRSSWPGLSTLAVRFLGCPPSTVPSEKLF--ST- 1136

  Fly   580 LYFDMQAG------LSPESASKMLLMKAN 602
               .|:||      |..|...|::.:|.|
  Rat  1137 ---PMEAGSFGQPRLMMEHFEKLIFLKVN 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_001285694.1 zf-BED 6..48 CDD:280965 16/47 (34%)
Dimer_Tnp_hAT 525..603 CDD:283379 28/87 (32%)
Zbed4NP_001128272.1 zf-BED 119..167 CDD:280965
zf-BED 289..337 CDD:280965
zf-BED 461..508 CDD:280965
zf-BED 562..609 CDD:280965 16/46 (35%)
Dimer_Tnp_hAT 1087..1163 CDD:283379 28/84 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8040
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I4686
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 1 1.000 - - FOG0006504
OrthoInspector 1 1.000 - - oto98503
orthoMCL 1 0.900 - - OOG6_111132
Panther 1 1.100 - - LDO PTHR46481
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.970

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