DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and bed-3

DIOPT Version :9

Sequence 1:NP_001285694.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_501785.1 Gene:bed-3 / 184940 WormBaseID:WBGene00009133 Length:599 Species:Caenorhabditis elegans


Alignment Length:443 Identity:67/443 - (15%)
Similarity:132/443 - (29%) Gaps:174/443 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKSNVWQYF--YKTSGTVATCLLCNRNYSRRGRGTTCLRNHLKSKHPPEF--------------- 51
            |.:.||:||  ..|....|.|.:|.:........||.:..||:|.|..|:               
 Worm   124 KTAKVWRYFDELPTIEQAAECRICRKKIKATNSSTTGMIRHLRSCHVQEYQLVQEARQNSMIVKM 188

  Fly    52 --------------LSLSGDIKYLDLVKSEISIGSPQHPTAQLE--------------------- 81
                          ..::..|:...:||.|....|.:.|:|...                     
 Worm   189 EEKARAKLLREMNEKVITNGIENTPIVKKESQTESQKSPSASSSASDTASSASSSHFSTNPLIGL 253

  Fly    82 ------------------LNLHETD----------------SDPLDT------------------ 94
                              |||.::.                ::|.|.                  
 Worm   254 PAPVAIKPPAPPTPSNSILNLSQSQNQCQNQNPMFQSQNIKNEPTDVEEEDLEQKRSRDILHRPS 318

  Fly    95 --------------------------EDISYSKRCDE------KLALMLL--NHSFEFIEGPGFV 125
                                      ||..:.|:.::      ::|||||  ....:.|:.||..
 Worm   319 DLGTKMFFSSPRTFNLTSAFSSITPLEDHKFQKKIEDDHKIHMQIALMLLLDQQPCQIIDRPGIR 383

  Fly   126 NFIRTLQPRYTIQPRSYYEKILCEDIQRKMHQHLKQQVDLL--DAISLSTSLWRGDKGEGLLSLS 188
            :..:.:.|.|.:.....::..:...:..:|    |||::.|  ::.|||:.     ..:.:.|.|
 Worm   384 SLFKFVLPEYHMPSGDVFQATIVPQLLNQM----KQQIEALVHNSSSLSSI-----PDQVMTSSS 439

  Fly   189 CSGISRDFQTHRLMLKCEALNYESTSKLACCIRDLVPSLAIEVPKEKI----HCVIRDEMTALPG 249
            .:....|...:...:....:..|..                |:.:|::    :..|.|:.::...
 Worm   440 ATSSYEDVSVNESQMAGPNVGDEEE----------------EIMEEEVEEDENVEIEDDTSSASS 488

  Fly   250 SLPDCSVHRLQMCVRF----ALQSNELLQNLSSKCKQIVDHFASSKMANDHLK 298
            |:...:...:...:.|    |...:||: :|.|....:..:|::......||:
 Worm   489 SIDTDTCDAMASFIHFIGNDAFPHDELI-SLLSVVTNLFTYFSTRPHVQTHLQ 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_001285694.1 zf-BED 6..48 CDD:280965 13/43 (30%)
Dimer_Tnp_hAT 525..603 CDD:283379
bed-3NP_501785.1 zf-BED 126..169 CDD:280965 13/42 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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