DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and zbed4

DIOPT Version :9

Sequence 1:NP_001285694.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002932232.1 Gene:zbed4 / 100270676 XenbaseID:XB-GENE-6076969 Length:1148 Species:Xenopus tropicalis


Alignment Length:658 Identity:152/658 - (23%)
Similarity:267/658 - (40%) Gaps:110/658 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKKKSNVWQYF--YKTSGTVATCLLCNRNYSRRGR----GTTCLRNHLKSKHPP--EFLSLSGDI 58
            |||.|.:|.:|  .....|...|:.|.|..||..:    ||:||..||:..|..  :..|:|..:
 Frog   536 SKKTSKLWNHFSICSADSTKVICMHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLQNNSVSETL 600

  Fly    59 KYLDL---VKSEISIGSPQHPTAQLELNLHETDSDPLDTEDISYSKRCDEKLALMLLNHSFEFIE 120
            :..|.   |.:|::..|.:..|.:.      :||.|:..:..|.   ..|.:||.|  ..:.|:.
 Frog   601 RPADSQTPVNTELAASSFEDTTDKF------SDSHPVAKKITSL---IAEMIALDL--QPYSFVN 654

  Fly   121 GPGFVNFIRTLQPRYTIQPRSYYEKILCEDIQRKMHQ----HLKQQVDLLDAISLSTSLWRGDKG 181
            ..||...:..|||:|::...||:.:....|:...:.|    |||:...  ..|..:..:|...:.
 Frog   655 NVGFNRLLEYLQPQYSLPSASYFSRTAIPDMYENVKQIIVSHLKEAES--GVIHFTAGIWMSSQT 717

  Fly   182 EGLLSLSCSGIS--RDFQTHRLMLKCEALNYESTSKLACCIRDLVPSLAIEVPKE--------KI 236
            ...|:|:...::  ..|:.|.....|.||.:  .|::.|...|:.....:|...|        :|
 Frog   718 REYLTLTAHWVTFESSFRPHCENHHCSALLH--VSQIDCDYNDVSVQKHLEYLWESWIASCGLQI 780

  Fly   237 HCVIRDE------MTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCKQIVDHFASSKMAND 295
            ...:.|.      :.....|...|..|.:.:.|..|::|..::|||.|..::|.:....|..|.:
 Frog   781 GITVTDNHSIAKTLNESEHSSVQCFGHTVDLIVNEAIKSQRMVQNLLSIARKICERVHRSTKAKE 845

  Fly   296 HLKFIQEIRLTRDPCTLTPYD----------PCQWNSAFQMMSSVFRMK---DALSLYCEEYSLV 347
            .|..:|:           .||          |.:||::|.|:..:...|   |.:|:.|....|:
 Frog   846 KLAELQK-----------EYDLPQHHLIQDVPSKWNTSFHMLDRLIEQKRAIDEMSIECSFRELI 899

  Fly   348 QIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTSSVIPLVAALRDSLRTDVHNFVSSVTICSFA 412
            ..  |:|..:......::|.|...:..|....|.|.|||::..|...:..   .|..::.|.:..
 Frog   900 SC--DQWEVMQSVCHALKPFEAASREMSMHMATLSQVIPMIHILNRKIEM---LFEETMGIDTML 959

  Fly   413 RKLLEELEMKFAHITSDINFLMATYLDPRYKQAFFTEREEQLVANEVLLQL---------AGVPE 468
            :.|.|.:..:.:....|..::.||.||||||.:.|:|.|.:.....::.:|         |.:..
 Frog   960 KSLKEAMVCRLSSTLHDPRYIFATLLDPRYKASLFSEEEAEEYKQGLIRELEILSSTSDDALILN 1024

  Fly   469 DCNGQPPLKIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIKNLLYLYNSEPR 533
            .||         .||:.....|..|.|::.:|..:.....:.|          :::::.|..|..
 Frog  1025 GCN---------KSSSPKSNGEENIWSLMANIKRSKALKEKLP----------EDIVFAYLEEEV 1070

  Fly   534 IDRNMDPLIWWRSNIKYISLYGIVRK----FLSAPAASVVSEGLFRKSTHLYFDMQAGLSPESAS 594
            ::.|.|||.:|  |:|. |.:.::.|    ||..|.:.:.||.||..:.......|..|..|...
 Frog  1071 LEHNCDPLTYW--NLKK-SAWPVLAKLAVRFLGCPPSIIPSERLFNTANENCNFNQNRLMMEHFE 1132

  Fly   595 KMLLMKAN 602
            :::.:|.|
 Frog  1133 QLIFLKVN 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_001285694.1 zf-BED 6..48 CDD:280965 15/47 (32%)
Dimer_Tnp_hAT 525..603 CDD:283379 23/82 (28%)
zbed4XP_002932232.1 zf-BED 105..152 CDD:335142
zf-BED 270..316 CDD:335142
zf-BED 442..488 CDD:335142
zf-BED 541..588 CDD:335142 14/46 (30%)
Dimer_Tnp_hAT 1065..1141 CDD:368565 23/79 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7185
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 137 1.000 Inparanoid score I4425
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 1 1.000 - - FOG0006504
OrthoInspector 1 1.000 - - oto105190
Panther 1 1.100 - - LDO PTHR46481
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3676
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.100

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