DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and zbed4

DIOPT Version :9

Sequence 1:NP_001285694.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001076410.1 Gene:zbed4 / 100000808 ZFINID:ZDB-GENE-041210-305 Length:1249 Species:Danio rerio


Alignment Length:681 Identity:159/681 - (23%)
Similarity:276/681 - (40%) Gaps:149/681 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKKKSNVWQYFYKTSG--TVATCLLCNRNYSRRGR----GTTCLRNHLKSKHP---PEFLSLSGD 57
            |||.|.:|.:|..:|.  |...||.|:|..||..:    ||:||..|::..|.   ....::|||
Zfish   630 SKKTSKLWNHFSISSADPTKVVCLHCSRTISRGKKTTNLGTSCLFRHMQRFHGHVLENNSNISGD 694

  Fly    58 IKYLDL-VKSEI-SIGSPQ---------HPTAQLELNLHETDSDPLDTEDISYSKRCDEKLALML 111
            ....:. ||.|: .|.:.|         ||.|:                  ..:|...|.|||.|
Zfish   695 GPSAETQVKQELMDISTYQENAEKFSECHPAAK------------------KITKLIAEMLALDL 741

  Fly   112 LNHSFEFIEGPGFVNFIRTLQPRYTIQPRSYYEKI----LCEDIQRKMHQHLKQQVDLLDAISLS 172
              .....:|..|....:..|||:|::.|.||:...    :.|.::..:..|||:...  ..|..:
Zfish   742 --QPSTVVENVGLNRLLEYLQPQYSLPPSSYFTSTAIPEMYESVKEVVLTHLKEAEG--GIIHFT 802

  Fly   173 TSLWRGDKGEGLLSLSCSGIS---------RDFQTHRLM----LKCE--------ALNY------ 210
            ||:|.|.:.:..|.|:...:|         :||....|:    :.|:        .|.|      
Zfish   803 TSVWIGSQTQEYLILTAHWVSFESQVLPQGQDFHCSALLGVASIDCDYNMLNIQKQLEYLWDTWM 867

  Fly   211 -ESTSKLACCIRDLVPSLAIEVPKEKIHCVIRDEMTALPGSLPDCSVHRLQMCVRFALQSNELLQ 274
             .|..|:...:.|              :..||:.:.:...:...|.||.:.:.|..|::|..::|
Zfish   868 GSSGLKIGFTVTD--------------NQTIRNVLESCDHTTMQCFVHNIDLIVNEAIKSQRMVQ 918

  Fly   275 NLSSKCKQIVDHFASSKMANDHLKFIQEI------RLTRDPCTLTPYDPCQWNSAFQMMSSVFRM 333
            ||.|..::|.:....|..|.:.|..:|::      :|.:|.       |.:|.:::.|:..:...
Zfish   919 NLLSIARKICERVHRSAKAKEKLAELQKVYQLPENQLVQDV-------PSKWKTSYFMLERLVEQ 976

  Fly   334 K---DALSLYCEEYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTSSVIPLVAALR--- 392
            |   |.:|:.|....|:..  |:|..:......::|.....:..||.:.|...||||:..|.   
Zfish   977 KKAIDEMSIECNFRELISC--DQWEVMGSVCNALKPFVVACREMSNRTATLGQVIPLIHILNRKI 1039

  Fly   393 DSLRTDVHNFVSSVTICSFARKLLEELEMKFAHITSDINFLMATYLDPRYKQAFFTEREEQLVAN 457
            |.|      |..::.|.:..:.|.|.|..:.:....|..::.||.||||||.:.|||.|.:...:
Zfish  1040 DML------FDETMGIDNMLKSLKEALVTRMSPTLHDPRYIWATMLDPRYKTSLFTEEEAEQCKH 1098

  Fly   458 EVLLQL-AGVPEDCNGQPPL----KIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQPNTSMGS 517
            :::.:| .........:.||    ..|..||.|...|:..:.|::|.|           ...:..
Zfish  1099 DLIQELEVSTSNSAETKTPLSNGCSEIPASSNSLASNKENLWSLMDDI-----------RQKIKQ 1152

  Fly   518 QSQIKNL---LYLYNSEPRIDRNMDPLIWWRSNIKYI---SLYGIVRKFLSAPAASVVSEGLFRK 576
            :.:.|:|   :..|..|..:|::.|||.:|  |:|.:   .|..:..:::..|.:.|.::.||..
Zfish  1153 EEKPKSLELAVLEYLEEDILDQSCDPLDYW--NLKKLLWPDLAKVAVRYVGCPPSIVPADTLFST 1215

  Fly   577 STHLYFDMQAGLSP-----ESASKMLLMKAN 602
            ||     :...|:.     |:...:|.:|.|
Zfish  1216 ST-----VNCALNQSRPLLENFEGLLFLKVN 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_001285694.1 zf-BED 6..48 CDD:280965 16/47 (34%)
Dimer_Tnp_hAT 525..603 CDD:283379 21/86 (24%)
zbed4NP_001076410.1 zf-BED 205..253 CDD:280965
zf-BED 368..414 CDD:280965
ZnF_BED 538..586 CDD:214746
zf-BED 634..681 CDD:280965 16/46 (35%)
Dimer_Tnp_hAT 1165..1242 CDD:283379 21/84 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7082
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 1 1.000 - - FOG0006504
OrthoInspector 1 1.000 - - oto39304
orthoMCL 1 0.900 - - OOG6_111132
Panther 1 1.100 - - LDO PTHR46481
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3676
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.850

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