DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13775 and zbed4

DIOPT Version :10

Sequence 1:NP_609087.1 Gene:CG13775 / 33975 FlyBaseID:FBgn0031874 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001076410.2 Gene:zbed4 / 100000808 ZFINID:ZDB-GENE-041210-305 Length:1249 Species:Danio rerio


Alignment Length:674 Identity:156/674 - (23%)
Similarity:283/674 - (41%) Gaps:135/674 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKKKSNVWQYFYKTSG--TVATCLLCNRNYSRRGR----GTTCLRNHLKSKHP---PEFLSLSGD 57
            |||.|.:|.:|..:|.  |...||.|:|..||..:    ||:||..|::..|.   ....::|||
Zfish   630 SKKTSKLWNHFSISSADPTKVVCLHCSRTISRGKKTTNLGTSCLFRHMQRFHGHVLENNSNISGD 694

  Fly    58 IKYLDL-VKSEISIGSPQHPTAQLELNLHETDSDPLDTEDISYSKRCDEKLALML---LNHSFEF 118
            ....:. ||.|:           ::::.|:.:::.. :|....:|:..:.:|.||   |..| ..
Zfish   695 GPSAETQVKQEL-----------MDISTHQENAEKF-SECHPAAKKITKLIAEMLALDLQPS-TV 746

  Fly   119 IEGPGFVNFIRTLQPRYTIQPRSYYEKI----LCEDIQRKMHQHLKQQVDLLDAISLSTSLWRGD 179
            :|..|....:..|||:|::.|.||:...    :.|.::..:..|||:...  ..|..:||:|.|.
Zfish   747 VENVGLNRLLEYLQPQYSLPPSSYFTSTAIPEMYESVKEVVLTHLKEAEG--GIIHFTTSVWIGS 809

  Fly   180 KGEGLLSLSCSGIS---------RDFQTHRLM----LKCE--------ALNY-------ESTSKL 216
            :.:..|.|:...:|         :||....|:    :.|:        .|.|       .|..|:
Zfish   810 QTQEYLILTAHWVSFESQVLPQGQDFHCSALLGVASIDCDYNMLNIQKQLEYLWDTWMGSSGLKI 874

  Fly   217 ACCIRDLVPSLAIEVPKEKIHCVIRDEMTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCK 281
            ...:.|              :..||:.:.:...:...|.||.:.:.|..|::|..::|||.|..:
Zfish   875 GFTVTD--------------NQTIRNVLESCDHTTMQCFVHNIDLIVNEAIKSQRMVQNLLSIAR 925

  Fly   282 QIVDHFASSKMANDHLKFIQEI------RLTRDPCTLTPYDPCQWNSAFQMMSSVFRMK---DAL 337
            :|.:....|..|.:.|..:|::      :|.:|.       |.:|.:::.|:..:...|   |.:
Zfish   926 KICERVHRSAKAKEKLAELQKVYQLPENQLVQDV-------PSKWKTSYFMLERLVEQKKAIDEM 983

  Fly   338 SLYCEEYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTSSVIPLVAALR---DSLRTDV 399
            |:.|....|:..  |:|..:......::|.....:..||.:.|...||||:..|.   |.|    
Zfish   984 SIECNFRELISC--DQWEVMGSVCNALKPFVVACREMSNRTATLGQVIPLIHILNRKIDML---- 1042

  Fly   400 HNFVSSVTICSFARKLLEELEMKFAHITSDINFLMATYLDPRYKQAFFTEREEQLVANEVLLQL- 463
              |..::.|.:..:.|.|.|..:.:....|..::.||.||||||.:.|||.|.:...::::.:| 
Zfish  1043 --FDETMGIDNMLKSLKEALVTRMSPTLHDPRYIWATMLDPRYKTSLFTEEEAEQCKHDLIQELE 1105

  Fly   464 AGVPEDCNGQPPL----KIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIKNL 524
            .........:.||    ..|..||.|...|:..:.|::|.|           ...:..:.:.|:|
Zfish  1106 VSTSNSAETKTPLSNGCSEIPASSNSLASNKENLWSLMDDI-----------RQKIKQEEKPKSL 1159

  Fly   525 ---LYLYNSEPRIDRNMDPLIWWRSNIKYI---SLYGIVRKFLSAPAASVVSEGLFRKSTHLYFD 583
               :..|..|..:|::.|||.:|  |:|.:   .|..:..:::..|.:.|.::.||..||     
Zfish  1160 ELAVLEYLEEDILDQSCDPLDYW--NLKKLLWPDLAKVAVRYVGCPPSIVPADTLFSTST----- 1217

  Fly   584 MQAGLSP-----ESASKMLLMKAN 602
            :...|:.     |:...:|.:|.|
Zfish  1218 VNCALNQSRPLLENFEGLLFLKVN 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13775NP_609087.1 zf-BED 6..48 CDD:427043 16/47 (34%)
Dimer_Tnp_hAT 525..603 CDD:399013 21/86 (24%)
zbed4NP_001076410.2 None

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