DRSC/TRiP Functional Genomics Resources

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Protein Alignment SA1 and rec11

DIOPT Version :10

Sequence 1:NP_477268.2 Gene:SA1 / 33974 FlyBaseID:FBgn0020616 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_588108.3 Gene:rec11 / 2538852 PomBaseID:SPCC4E9.01C Length:923 Species:Schizosaccharomyces pombe


Alignment Length:950 Identity:169/950 - (17%)
Similarity:329/950 - (34%) Gaps:252/950 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ELHSDA---LNESTSDADS----------PTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKR 72
            |..|||   |||..::.:|          |:.:...:.|                   :|..:||
pombe     4 EFESDASSHLNEVLTELESVELENVEYEGPSLQNVSICA-------------------SPSEKKR 49

  Fly    73 KTPATRK-GPTERKERVERPRKEPVDKGHHERIDSEREITTDENSLYYIVRHSKNPIASIVDQWI 136
            |.....: ..||.:|..|....|.:....|:....:        ..:..:.....|:..:...:.
pombe    50 KWGTQDEFSLTENEENNEIETNEEMHVNSHDYAFPQ--------EFFLKLLDIDMPLEQLSQHYF 106

  Fly   137 EQYKANRETALVALMQFFINASGCKGKISE-DIQYPVDHTSIIRRMTE----EFDEESGEYPLIM 196
            |.||:|....::..:.|.:.||||:..::. |:|   |..||...:::    .|.:.|..|...:
pombe   107 EDYKSNSADFMLTFINFALVASGCQPFVTNFDVQ---DVDSIPETLSQVNRSSFQKSSCAYTDYL 168

  Fly   197 SGTQWRKFKNNFCDFVQTLVKQCQYSIIYDQFL----MDNVISLLTGLSDSQVRAFRHTATLAAM 257
            ..:..::.|.....|...||:......:.|.||    |:...:.:..::.|.....|||||....
pombe   169 YTSNSKEAKTVRIRFQLFLVEFISKVYVEDAFLGDSFMETTKAWIFTMTTSPWMLVRHTATTICC 233

  Fly   258 KLMTALVDVALLVSNNFDNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIKSMLTYMF 322
            .:|..|    .|:.|.....:.| .||.:..||          :|.|         ...|:..:.
pombe   234 DIMRCL----CLIVNKLSEKSNQ-TAEILVLRD----------LTSR---------FIDMIHDIC 274

  Fly   323 KSVFVHRYRDSLPDIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDKIGEVRLRCLQSL--L 385
            .||...|..|....||.:|:..:....:..|...::.:.:::.||.|.|...::|...|:.:  |
pombe   275 DSVLFSRIHDIRASIRIVCVTALYDCCQLLPTYLINRNLIRHSGWGLSDAESQIRKISLKIIDYL 339

  Fly   386 PLYEKDELKGKLELFTSKFKDRIVAMTLDKEFEV-SVHAVKLVISILKIHPEILADKDC-EIVYE 448
            ..:|.::.:..:..|..:|..|||.:.   .::: ||.:|.|. :..|:..:|..:..| .||..
pombe   340 SSHEPEKDQDFVVDFLDRFSLRIVEIC---RYDIDSVRSVALK-TCEKLMEKISLNGKCINIVSS 400

  Fly   449 LVYSSHRGVAQAAAEFLNVRLFHLT---ADMEETKT---------KRGKVRMPNTPLV------- 494
            .::.   |..|.....:.:.:.|..   |:..|.||         :|.|:     ||:       
pombe   401 CIFD---GKPQNRISTMRILVAHTNERYANYCEAKTATISLSKLLRREKI-----PLLVSSFESL 457

  Fly   495 ------------------RDL-------------------------VQFFIESELHEHGAYLVDS 516
                              ||.                         ..|..|.:::.|...|::.
pombe   458 FKMNALLFILEQGFESWFRDSSDHIFSRVKDDDKFVYQSQENNFYDADFIREYDMNNHRQQLIEE 522

  Fly   517 FIDS----NDMVRDWECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATGEVPVGRASNR 577
            .:.|    :.::..||.:..|||.:.      .|.|..::::...:.|........:.:...:..
pombe   523 SMHSIHTNSQLLASWEDVAKLLLYDR------FDAKDTNSVLNPCIPSNAVIEFSSIYLHYFATH 581

  Fly   578 KCTLSAKELKAIQDEKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNLYTTNRQEGNL 642
            ....|.|..|.::||.....:..:..||.||:||:..        .|..||.:..         :
pombe   582 ISKRSKKPGKRLEDEVVNQQQAMLRNLPLLLQKYRES--------CVSSYFFIKC---------V 629

  Fly   643 QALLDRINQVMSMHTG-----REVLE----TCAKTLECLCAEGSATYTRCNIARSNIIESAVNKY 698
            :.:.|.:......|..     :|:|:    |....|..||:..........:.:.:|:.:..|.|
pombe   630 EQIPDELLYKREFHKDFSKLYKEILDIFNSTTVNFLMILCSRFFHRLAVNKVVQEDILFAIDNVY 694

  Fly   699 KDAIEEW---------------RNLIQG-EETPN-------------------EDDIYNITI--- 725
            .|..|..               :|.:.| :||.|                   :.:.:||.:   
pombe   695 NDLAESLHEQLNAYIQRKKINKKNQLNGNDETQNLVLALNKFGCFAKEMVCLRDVNDWNIKLSEK 759

  Fly   726 ----------------TLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENIDRCLPNEALVYCI 774
                            :||||.:|..|...:...:|.::|....:...::|.:..|....:...:
pombe   760 LCEICSLEVGPIVCYSSLKVLFLLLLSDMRDRNCIFTNIFLKAAKVAKQKNGNSFLSKVFITITM 824

  Fly   775 EACYF---SISWGLQYVENECESVNVTEVVAELRNNLDTF 811
            ...:.   :.:|.:.:.:::.:.:|..|::.:    ::||
pombe   825 LTLFLGSKANNWDINFSDDDLKLMNEEEIMEQ----IETF 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA1NP_477268.2 IRR1 66..>426 CDD:227824 78/372 (21%)
STAG 190..303 CDD:462502 24/116 (21%)
rec11NP_588108.3 IRR1 2..766 CDD:227824 154/850 (18%)

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